A1SWB3 (A1SWB3_PSYIN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycoside hydrolase, clan GH-D EMBL ABM03778.1

Gene names

Ordered Locus Names:

Ping_2014

Organism

Psychromonas ingrahamii (strain 37) [Complete proteome] [HAMAP] EMBL ABM03778.1

Taxonomic identifier

357804 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Psychromonadaceae › Psychromonas

Protein attributes

Sequence length	700 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABM03778.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-galactosidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1SWB3 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: 5AC09B318EEE8D02	FASTA	700	80,264
	10 20 30 40 50 60 MKNIIHLTSK NCSLIIKVET TPEILHWGPK INQIDPDILL ATERPIPQAR LDVDVPLSLC 70 80 90 100 110 120 PELGSGHFNA PGLEGHRESF DWAPVFEVFD QDLAAQSVVF KLQDKVAKLQ LEIEIKLDFE 130 140 150 160 170 180 SDVIQKRIKV INTGETKYSL TKLSSTLPLP NHANELMSFH GRWSREFQTH RQRFAHGGFM 190 200 210 220 230 240 QENRRGRTSH ENFPGLFVGS DHFNEQNGQV WGFHLGWSGN HQLRADVRSD GRRFVQAGEL 250 260 270 280 290 300 LLSGEVVLGA LESYSTPWLY ATYSAAGLNG ISEHFHRFVR DNIIKFPEDK PRPVHLNTWE 310 320 330 340 350 360 GIYFEHDPQY IMKMANEAAV MGVERFIIDD GWFIGRHGER AALGDWYLDK EKYPNGLEPV 370 380 390 400 410 420 IKHVNDLDME FGLWVEPEMV SEESMLYRAH PDWVLALQGY HQPSGRWQYV LDLQNTACFN 430 440 450 460 470 480 YLFERLNDLL TRYNISYLKW DMNRELVQPG HQGKPAVSGQ TNALYALLDK LLAVHTEVEI 490 500 510 520 530 540 ESCSSGGGRI DFEILKRTHR FWPSDCNDAL ERQTIQRGMS YFFPPEVMGT HIGPEESHTT 550 560 570 580 590 600 RRVHHINMRG MTALSGHMGV ELDPVKVPVE ERQAFAKYIA LHKQYRHLLH SGRSFRVDTA 610 620 630 640 650 660 DNSQNIYGVH NNDEMLITVC QLTMPDYALP SPLRISCIDT TAQYQVNLVE TPENSFQLMK 670 680 690 700 QRPKWLDKTL TLSGESLKEI GLSLPILDPE SALMLHLKKR

References

[1]

"Complete sequence of Psychromonas ingrahamii 37." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F. , Land M., Hauser L., Kyrpides N., Ivanova N., Staley J., Richardson P. Submitted (JAN-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 37.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000510 Genomic DNA. Translation: ABM03778.1.
RefSeq	YP_943377.1. NC_008709.1.
3D structure databases
ProteinModelPortal	A1SWB3.
ModBase	Search...
Protein-protein interaction databases
STRING	A1SWB3.
Protein family/group databases
CAZy	GH36. Glycoside Hydrolase Family 36.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4626520.
GenomeReviews	Gene locus Ping_2014 in contig CP000510_GR.
KEGG	pin:Ping_2014.
PATRIC	23069229. VBIPsyIng103130_2216.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3345.
HOGENOM	HBG299823.
OMA	TPWLYAS.
ProtClustDB	CLSK888896.
Enzyme and pathway databases
BioCyc	PING357804:PING_2014-MONOMER.
Family and domain databases
InterPro	IPR013785. Aldolase_TIM. IPR002252. Glyco_hydro_36. IPR000111. Glyco_hydro_GHD. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KO	K07407.
Pfam	PF02065. Melibiase. 1 hit. [Graphical view]
PIRSF	PIRSF005536. Agal. 1 hit.
PRINTS	PR00743. GLHYDRLASE36.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A1SWB3_PSYIN

Accession

Primary (citable) accession number: A1SWB3

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	December 14, 2011
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)