Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Isocitrate dehydrogenase, NADP-dependent

Gene

Ping_0983

Organism
Psychromonas ingrahamii (strain 37)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Cofactori

Mg2+UniRule annotation, Mn2+UniRule annotationNote: Binds 1 Mg(2+) or Mn2+ ion per subunit.UniRule annotation

GO - Molecular functioni

  1. isocitrate dehydrogenase (NADP+) activity Source: UniProtKB-EC
  2. metal ion binding Source: UniProtKB-KW

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Keywords - Ligandi

MagnesiumUniRule annotation, Metal-bindingUniRule annotation

Enzyme and pathway databases

BioCyciPING357804:GJBJ-1046-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Isocitrate dehydrogenase, NADP-dependentImported (EC:1.1.1.42Imported)
Gene namesi
Ordered Locus Names:Ping_0983Imported
OrganismiPsychromonas ingrahamii (strain 37)Imported
Taxonomic identifieri357804 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesPsychromonadaceaePsychromonas
ProteomesiUP000000639: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3535 PotentialImportedAdd
BLAST
Chaini36 – 742707 PotentialImportedPRO_5000206594Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi357804.Ping_0983.

Structurei

3D structure databases

ProteinModelPortaliA1STK8.
SMRiA1STK8. Positions 5-742.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG2838.
HOGENOMiHOG000240860.
KOiK00031.
OMAiDENRAHD.
OrthoDBiEOG6DVJPP.

Family and domain databases

Gene3Di3.40.718.10. 3 hits.
InterProiIPR004436. Isocitrate_DH_NADP_mono.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PfamiPF03971. IDH. 1 hit.
[Graphical view]
PIRSFiPIRSF009407. IDH_monmr. 1 hit.
TIGRFAMsiTIGR00178. monomer_idh. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A1STK8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTDKSAKIIY TQTDEAPALA TYSLLPIVSA FTQAADITVE TRDISLAARI
60 70 80 90 100
LATFPDNLSA EQKQADALTE LGELAQQPQA NIIKLPNVSA SVPQLHAAIK
110 120 130 140 150
ELQSHGFDIP NYPEDPKTEA EKEAKARYAK VLGSAVNPVL REGNSDRRVA
160 170 180 190 200
DAVKQYAQDH PHRMGAWSKE SKSHVADMSE GDFYGSEQSV VLKEADDVKI
210 220 230 240 250
EFTSTSGAVS VLKASTPVLK DEVIDASVMS CSALRDFYET QMQDAKENNI
260 270 280 290 300
MLSLHLKATM MKVSDPVMFG HAVTVYFKDV FAKHAVLFAE LGVDPRNGLG
310 320 330 340 350
DVYSKIANLP AEQKEQIEAD IQEAYATGPA LAMVDSDKGI SNLHVPSDVI
360 370 380 390 400
IDASMPAAIR TSGCMWGLDG KLHDTKAMIP DRCYSGIYQE TISFCREHGA
410 420 430 440 450
FDPATMGNVS NVGLMAQKAE EYGSHDKTFI IKEAGSVKVI DQAGNTLMEH
460 470 480 490 500
AVEEGDIWRM CQAKDIPIQD WVRLAVSRAR ATGQPAIFWL DEKRAHDGNL
510 520 530 540 550
ITKVNHYLKD HDTDGLDISI LSPIDAIKIT LQRVSEGKNT ISVTGNVLRD
560 570 580 590 600
YLTDLFPILE LGTSAKMLSI VPLLAGGGLF ETGAGGSAPK HVQQFIEEGH
610 620 630 640 650
LRWDSIGEFL AIAVSIEDMA EKTGNKKALV LAETLHVANG KFLKEDRSPS
660 670 680 690 700
RKVKEIDNRG SHFYLAMYWA EALAAQSKDT ELQAKFAPLA KVLTDNEEKI
710 720 730 740
LAELAAAQGT PVDLGGYFHT DPVKMAAAMR PSTILNAALA TL
Length:742
Mass (Da):80,725
Last modified:February 6, 2007 - v1
Checksum:i01A0A0DE0A6EA2AE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000510 Genomic DNA. Translation: ABM02823.1.
RefSeqiWP_011769386.1. NC_008709.1.
YP_942422.1. NC_008709.1.

Genome annotation databases

EnsemblBacteriaiABM02823; ABM02823; Ping_0983.
GeneIDi4626572.
KEGGipin:Ping_0983.
PATRICi23066921. VBIPsyIng103130_1082.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000510 Genomic DNA. Translation: ABM02823.1.
RefSeqiWP_011769386.1. NC_008709.1.
YP_942422.1. NC_008709.1.

3D structure databases

ProteinModelPortaliA1STK8.
SMRiA1STK8. Positions 5-742.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi357804.Ping_0983.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABM02823; ABM02823; Ping_0983.
GeneIDi4626572.
KEGGipin:Ping_0983.
PATRICi23066921. VBIPsyIng103130_1082.

Phylogenomic databases

eggNOGiCOG2838.
HOGENOMiHOG000240860.
KOiK00031.
OMAiDENRAHD.
OrthoDBiEOG6DVJPP.

Enzyme and pathway databases

BioCyciPING357804:GJBJ-1046-MONOMER.

Family and domain databases

Gene3Di3.40.718.10. 3 hits.
InterProiIPR004436. Isocitrate_DH_NADP_mono.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PfamiPF03971. IDH. 1 hit.
[Graphical view]
PIRSFiPIRSF009407. IDH_monmr. 1 hit.
TIGRFAMsiTIGR00178. monomer_idh. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 37Imported.

Entry informationi

Entry nameiA1STK8_PSYIN
AccessioniPrimary (citable) accession number: A1STK8
Entry historyi
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: February 4, 2015
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.