A1STC0 (A1STC0_PSYIN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Isoamylase EMBL ABM02735.1

Gene names

Ordered Locus Names:

Ping_0893

Organism

Psychromonas ingrahamii (strain 37) [Complete proteome] [HAMAP] EMBL ABM02735.1

Taxonomic identifier

357804 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Psychromonadaceae › Psychromonas

Protein attributes

Sequence length	693 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycogen catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro glycogen debranching enzyme activity Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1STC0 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: 0EDC83405DF242C2	FASTA	693	78,999
	10 20 30 40 50 60 MYELLPGKTH PIGATVEDGG VNFCLYCDER STSVELLLFE QHNALEPYEI IRFDPLIHRS 70 80 90 100 110 120 FYFWHIFVKG LPEKTHYAYR VGGPFQPENG LVFDPQKVLI DPYSKGINCS LWQRNDACKA 130 140 150 160 170 180 GDNLHTSMRS CVLKLTDYDW QGDSPPNHHL NESIIYEMNV GGFTKSPTSG VKHPGTYAGI 190 200 210 220 230 240 IEKIPYLTAL GITAVELLPI FEFEDSEVRY FNGNKLVNYW GYSTINFFAP HSGYCVNPQE 250 260 270 280 290 300 GNHLDEFRDL VKALHQADIS VILDVVFNHT DESDHRGPVY SFKGFANNSY YFLMDKHKNF 310 320 330 340 350 360 YCNYSGCGNT FKCNHPIGEK FIVDCLEYWV RDMHVDGFRF DEGTILARGD NGNLIANPPV 370 380 390 400 410 420 VWAIELSEQL ADTKVIAEAW DAEGGYLVGS FPGHRWAEWN GLYRDDLRDF VRGKAGMLGT 430 440 450 460 470 480 FARRITGSAD IYESQYELPG NSINFINSHD GFTLNDLVSY NHKHNQANGE NNSDGIDNNR 490 500 510 520 530 540 SWNCGVEGIT DNPQINMLRK RQIKNFAAIL MLSKGVPMFV AGDEICRTQQ GNNNAYCQDN 550 560 570 580 590 600 ELSWFNWQDV DTNKSMLQFW QRLIAFRKVH PRLFRNKYYN SEINKSGLSD ILWHGCELGK 610 620 630 640 650 660 PGWYDPSGLA LAMTLGERAD GEDIHIMFNM YWEGLEFELP DIEGEKWYRA IDTFLSSPLD 670 680 690 IAKTGEEIVH SGSHYKVNAR SVVVLISKKD PIC

References

[1]

"Complete sequence of Psychromonas ingrahamii 37." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F. , Land M., Hauser L., Kyrpides N., Ivanova N., Staley J., Richardson P. Submitted (JAN-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 37.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000510 Genomic DNA. Translation: ABM02735.1.
RefSeq	YP_942334.1. NC_008709.1.
3D structure databases
ProteinModelPortal	A1STC0.
ModBase	Search...
Protein-protein interaction databases
STRING	A1STC0.
Protein family/group databases
CAZy	CBM48. Carbohydrate-Binding Module Family 48. GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4624381.
GenomeReviews	Gene locus Ping_0893 in contig CP000510_GR.
KEGG	pin:Ping_0893.
PATRIC	23066695. VBIPsyIng103130_0984.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1523.
HOGENOM	HBG350946.
OMA	VVREFIV.
PhylomeDB	A1STC0.
ProtClustDB	CLSK568886.
Enzyme and pathway databases
BioCyc	PING357804:PING_0893-MONOMER.
Family and domain databases
InterPro	IPR015902. Alpha_amylase. IPR013780. Glyco_hydro_13_b. IPR006047. Glyco_hydro_13_cat_dom. IPR004193. Glyco_hydro_13_N. IPR013781. Glyco_hydro_subgr_catalytic. IPR011837. Glycogen_debranch_debranch. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. IPR014756. Ig_E-set. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
KO	K02438.
PANTHER	PTHR10357. Alpha_amylase. 1 hit. PTHR10357:SF74. PTHR10357:SF74. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. PF02922. CBM_48. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit. SSF81296. Ig_E-set. 1 hit.
TIGRFAMs	TIGR02100. GlgX_debranch. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A1STC0_PSYIN

Accession

Primary (citable) accession number: A1STC0

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	January 25, 2012
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)