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A1SSS1 (A1SSS1_PSYIN) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Cystathionine beta-lyase EMBL ABM02536.1
EC=4.4.1.8 EMBL ABM02536.1
Gene names
Ordered Locus Names:Ping_0683
OrganismPsychromonas ingrahamii (strain 37) [Complete proteome] [HAMAP] EMBL ABM02536.1
Taxonomic identifier357804 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Psychromonadaceae › Psychromonas

Protein attributes

Sequence length407 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL ABM02536.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcellular amino acid metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: InterPro

   Molecular functioncystathionine beta-lyase activity

Inferred from electronic annotation. Source: EC

pyridoxal phosphate binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A1SSS1 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: 473F920D31F945B7

FASTA40745,362
        10         20         30         40         50         60 
MLIWYYLRYL PMEINMKKET QIVCLGRNKK WTKGVVNPPV VRASTMLFDT MEDMRFAGKN 

        70         80         90        100        110        120 
KNNGEMYYGR RGGPTHFAFQ EAIAELEGGA GTALYPSGTA AISSALMSFL KAGDHLLMLD 

       130        140        150        160        170        180 
NAYEPTRALC DTLLAGFGIE TTYYDPLIGA GISELIQPNT KVLFLESPGS ITMEIQDVPT 

       190        200        210        220        230        240 
LSRIAHENNL IVMLDNTWAS PINSRPFEMG VDISIQAATK YIVGHSDVMM GTATANTKYW 

       250        260        270        280        290        300 
PTLREHSYLL GQCTSPDDVY LASRGLRTLG VRMAQHEKNA LAVANWLATR PEVDHLRHPA 

       310        320        330        340        350        360 
FETCPGHEFF KRDFSGSNGL FSFVLKEGNL KSVTALVENM DYFKMGFSWG GFESLILGVF 

       370        380        390        400 
GIDKIRTVTQ WDKSKPLIRL HVGLENVDDL IADLEAGFER MNKALSK

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References

[1]"Complete sequence of Psychromonas ingrahamii 37."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F. expand/collapse author list , Land M., Hauser L., Kyrpides N., Ivanova N., Staley J., Richardson P.
Submitted (JAN-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 37.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000510 Genomic DNA. Translation: ABM02536.1.
RefSeqYP_942135.1. NC_008709.1.

3D structure databases

ProteinModelPortalA1SSS1.
SMRA1SSS1. Positions 17-401.
ModBaseSearch...

Protein-protein interaction databases

STRINGA1SSS1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4626480.
GenomeReviewsGene locus Ping_0683 in contig CP000510_GR.
KEGGpin:Ping_0683.
PATRIC23066201. VBIPsyIng103130_0748.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0626.
HOGENOMHBG754729.
OMADVFMGSA.
PhylomeDBA1SSS1.
ProtClustDBPRK09028.

Enzyme and pathway databases

BioCycPING357804:PING_0683-MONOMER.

Family and domain databases

InterProIPR000277. Cys/Met-Metab_PyrdxlP-dep_enz.
IPR006233. Cys_b_lyase_bac.
IPR015424. PyrdxlP-dep_Trfase_major_dom.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
Gene3DG3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit.
G3DSA:3.90.1150.10. PyrdxlP-dep_Trfase_major_sub2. 1 hit.
KOK01760.
PANTHERPTHR11808:SF8. Cys_b_lyase_bac. 1 hit.
PTHR11808. Cys_Met_Meta_PP. 1 hit.
PfamPF01053. Cys_Met_Meta_PP. 1 hit.
[Graphical view]
PIRSFPIRSF001434. CGS. 1 hit.
SUPFAMSSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMsTIGR01324. Cysta_beta_ly_B. 1 hit.
PROSITEPS00868. CYS_MET_METAB_PP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA1SSS1_PSYIN
AccessionPrimary (citable) accession number: A1SSS1
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: January 25, 2012
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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