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Protein

Ribosomal RNA large subunit methyltransferase F

Gene

rlmF

Organism
Psychromonas ingrahamii (strain 37)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Specifically methylates the adenine in position 1618 of 23S rRNA.UniRule annotation

Catalytic activityi

S-adenosyl-L-methionine + adenine(1618) in 23S rRNA = S-adenosyl-L-homocysteine + rRNA containing N6-methyladenine(1618) in 23S rRNA.UniRule annotation

GO - Molecular functioni

Keywordsi

Molecular functionMethyltransferase, Transferase
Biological processrRNA processing
LigandS-adenosyl-L-methionine

Enzyme and pathway databases

BioCyciPING357804:G1G7R-635-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal RNA large subunit methyltransferase FUniRule annotation (EC:2.1.1.181UniRule annotation)
Alternative name(s):
23S rRNA mA1618 methyltransferaseUniRule annotation
rRNA adenine N-6-methyltransferaseUniRule annotation
Gene namesi
Name:rlmFUniRule annotation
Ordered Locus Names:Ping_0599
OrganismiPsychromonas ingrahamii (strain 37)
Taxonomic identifieri357804 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesPsychromonadaceaePsychromonas
Proteomesi
  • UP000000639 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003499431 – 310Ribosomal RNA large subunit methyltransferase FAdd BLAST310

Proteomic databases

PRIDEiA1SSI8

Interactioni

Protein-protein interaction databases

STRINGi357804.Ping_0599

Structurei

3D structure databases

ProteinModelPortaliA1SSI8
SMRiA1SSI8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the methyltransferase superfamily. METTL16/RlmF family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105EBA Bacteria
COG3129 LUCA
HOGENOMiHOG000218605
KOiK06970
OMAiTEFHQGH
OrthoDBiPOG091H05H4

Family and domain databases

HAMAPiMF_01848 23SrRNA_methyltr_F, 1 hit
InterProiView protein in InterPro
IPR016909 rRNA_lsu_MeTfrase_F
IPR010286 rRNA_lsu_MeTfrase_F-like
IPR029063 SAM-dependent_MTases
PANTHERiPTHR13393 PTHR13393, 1 hit
PfamiView protein in Pfam
PF05971 Methyltransf_10, 1 hit
PIRSFiPIRSF029038 Mtase_YbiN_prd, 1 hit
SUPFAMiSSF53335 SSF53335, 1 hit

Sequencei

Sequence statusi: Complete.

A1SSI8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTKDIQVKKL LHPRNLHRGH YDLKQLCEQS PLLSTFLRTN PKGEQTLDFA
60 70 80 90 100
EPQAVLLLNQ VLLKQFYHVD FWQIPKGYLC PPIPGRVDYI HYLADLLGDT
110 120 130 140 150
FHGKIPEGKQ VKVLDIGTGA NCIYPILGSQ SYGWSFVGTD IDPLSVKMAG
160 170 180 190 200
LIIKSNVSLK PFIKVQLQAN KQAIFAGIIK PKDKFTLTMC NPPFHASMEK
210 220 230 240 250
ALAGSARKIK NLSNDQNNLS RVLNFAGQEG ELCCAGGEIR FLKQMIQESK
260 270 280 290 300
DYARQVCWFT SLVSKSDNIA PLKQQLEKVG AEHVKVIKMA QGQKVSRFIA
310
WSFLPQPQNF
Length:310
Mass (Da):34,853
Last modified:February 6, 2007 - v1
Checksum:i16FE810B6AD4BCFC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000510 Genomic DNA Translation: ABM02453.1
RefSeqiWP_011769012.1, NC_008709.1

Genome annotation databases

EnsemblBacteriaiABM02453; ABM02453; Ping_0599
KEGGipin:Ping_0599

Similar proteinsi

Entry informationi

Entry nameiRLMF_PSYIN
AccessioniPrimary (citable) accession number: A1SSI8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 2, 2008
Last sequence update: February 6, 2007
Last modified: May 23, 2018
This is version 65 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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