A1SSE5 (A1SSE5_PSYIN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL ABM02410.1

Gene names

Ordered Locus Names:

Ping_0556

Organism

Psychromonas ingrahamii (strain 37) [Complete proteome] [HAMAP] EMBL ABM02410.1

Taxonomic identifier

357804 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Psychromonadaceae › Psychromonas

Protein attributes

Sequence length	620 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABM02410.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 23	23	Potential EMBL ABM02410.1
	Chain	24 – 620	597	Potential EMBL ABM02410.1		PRO_5000206505

Sequences

	Sequence		Length	Mass (Da)
	A1SSE5 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: CD2A0411BF90A7C5	FASTA	620	67,237
	10 20 30 40 50 60 MKKSSYKIFL IAFLSIFMFA CGDEPLTTLL NNTSSAGDTG TLQPQAIVSD APLSKSGEQI 70 80 90 100 110 120 LGNPDYQAIS YGAFRAPTRE EATVPSVADL KEDMLLLQAM DIKVLRTYNT QIFSDTANLL 130 140 150 160 170 180 EAIDQLMAAD PNFEMYVMLG VWVQAQGSYT ANVDNTTGDA ALNRAEMDKA IEMAQNYPEI 190 200 210 220 230 240 IKVIAVGNEA MVDWQAHDIP VSVVLGYVNE LQGLKADSTI SADIWITSSD NQAVWSGSDP 250 260 270 280 290 300 RVSGQLNDLN ALIAAVDYIS LHTYPFHDTH HIPDFWQVPA DQAGLTDQQK IDAAMVRAQA 310 320 330 340 350 360 RVVEQYTAAQ AYMLKLGINK PIHIGETGWA TVGSPGGEDF TQSGSAAADE YKQKMAYDAL 370 380 390 400 410 420 RTWSNEFGAS LFFFEAFDEQ WKAGTENPAT HPEKHFGLIN MQGEAKYLLW DLVDAGAFNG 430 440 450 460 470 480 LERDGLQITK TYGGNVAAMM DEVFVPPAAP VTNEPVAGEF IVLGISLYSN ALAYGWDSPE 490 500 510 520 530 540 TAWAGVNDDT GVLTVATDPD TAATWGWGAG VGIPNETSNL STSTQITFEI KGDAAFGFYL 550 560 570 580 590 600 GFQTTKGAGT NHWVRFNTGS YTLTDQWAKY TISLSDFSDF ASGNLEVVNS PFTIADIYET 610 620 SGGSAPTLST IEVKNISWLE

References

[1]

"Complete sequence of Psychromonas ingrahamii 37." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F. , Land M., Hauser L., Kyrpides N., Ivanova N., Staley J., Richardson P. Submitted (JAN-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 37.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000510 Genomic DNA. Translation: ABM02410.1.
RefSeq	YP_942009.1. NC_008709.1.
3D structure databases
ProteinModelPortal	A1SSE5.
ModBase	Search...
Protein-protein interaction databases
STRING	A1SSE5.
Protein family/group databases
CAZy	GH17. Glycoside Hydrolase Family 17.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4623933.
GenomeReviews	Gene locus Ping_0556 in contig CP000510_GR.
KEGG	pin:Ping_0556.
PATRIC	23065921. VBIPsyIng103130_0613.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG5309.
HOGENOM	HBG265625.
OMA	WITSSDN.
ProtClustDB	CLSK578686.
Enzyme and pathway databases
BioCyc	PING357804:PING_0556-MONOMER.
Family and domain databases
InterPro	IPR008979. Galactose-bd-like. IPR000490. Glyco_hydro_17. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
Pfam	PF00332. Glyco_hydro_17. 1 hit. [Graphical view]
SUPFAM	SSF49785. Gal_bind_like. 1 hit. SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A1SSE5_PSYIN

Accession

Primary (citable) accession number: A1SSE5

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)