ATP synthase subunit alpha 1 - Psychromonas ingrahamii (strain 37)

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A1SS62 (ATPA1_PSYIN) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 51. History...

Clusters with 100%, 90%, 50% identity |

Documents (1) |

Third-party data

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents Customize order

Names and origin

Protein names

Recommended name:
ATP synthase subunit alpha 1
EC=3.6.3.14

Alternative name(s):
ATP synthase F1 sector subunit alpha 1
F-ATPase subunit alpha 1

Gene names

Name:	atpA1
Ordered Locus Names:	Ping_0470

Organism

Psychromonas ingrahamii (strain 37) [Complete proteome] [HAMAP]

Taxonomic identifier

357804 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Psychromonadaceae › Psychromonas

Protein attributes

Sequence length	519 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit By similarity. HAMAP MF_01346
Catalytic activity	ATP + H₂O + H⁺(In) = ADP + phosphate + H⁺(Out). HAMAP MF_01346
Subunit structure	F-type ATPases have 2 components, CF₁ - the catalytic core - and CF₀ - the membrane proton channel. CF₁ has five subunits: alpha₃, beta₃, gamma₁, delta₁, epsilon₁. CF₀ has three main subunits: a₁, b₂ and c(9-12). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. CF₁ is attached to CF₀ by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains By similarity.
Subcellular location	Cell inner membrane; Peripheral membrane protein By similarity HAMAP MF_01346.
Sequence similarities	Belongs to the ATPase alpha/beta chains family.

Ontologies

Keywords
Biological process	ATP synthesis Hydrogen ion transport Ion transport Transport
Cellular component	CF(1) Cell inner membrane Cell membrane Membrane
Ligand	ATP-binding Nucleotide-binding
Molecular function	Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	ATP hydrolysis coupled proton transport Inferred from electronic annotation. Source: InterPro ATP synthesis coupled proton transport Inferred from electronic annotation. Source: InterPro
Cellular component	plasma membrane Inferred from electronic annotation. Source: UniProtKB-SubCell proton-transporting ATP synthase complex, catalytic core F(1) Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW hydrogen ion transporting ATP synthase activity, rotational mechanism Inferred from electronic annotation. Source: InterPro proton-transporting ATPase activity, rotational mechanism Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Chain

1 – 519

519

ATP synthase subunit alpha 1 HAMAP MF_01346

PRO_0000339048

Regions

Nucleotide binding

172 – 179

ATP By similarity

Sites

Site

365

Required for activity By similarity

Sequences

Sequence

Length

Mass (Da)

Tools

A1SS62 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: 019CD2CBBB022332
Show »

FASTA

519

56,659

        10         20         30         40         50         60 
MTDLQQVVAH SFAALAASRT TFRAQLKARE IGIISSVSFG VAQVSGLANV ASEEVLKFSG 

        70         80         90        100        110        120 
DIYGIAFNVD QDSIGVVLLG DYWQLQSGDE VERTGRVMDV AVGLGLLGRV IDPLGRPLDD 

       130        140        150        160        170        180 
KGPIESSERL PVERPAAPIM DRAPVTVPLQ TGLKVIDALI PIGRGQRELI LGDRQTGKTT 

       190        200        210        220        230        240 
IAIDTILNQH DQNVLCVYCA IGQRASAVAK TIAILKAKGA LDYTLVMVSE GNAPPGFAYI 

       250        260        270        280        290        300 
APYAATSIAE YFMEKGRDVL IVYDDLTQHA RAYRELSLLL RRPPGREAFP GDIFYIHSRL 

       310        320        330        340        350        360 
LERATCLKQR HKGGSLTALP IIETEAQNIS AYIPTNLISI TDGQIYLSPT LFELGILPAV 

       370        380        390        400        410        420 
DVGRSVSRVG GKAQRPMYRA VAANLKLTYA QFEELETFAR FGARLDQNSQ DIITNGRRIR 

       430        440        450        460        470        480 
ASLKQPQSSP MTVLEQITVL IALTEKLFDT VPLLKMREAE QALCLATTEL PEDFLSRFNS 

       490        500        510 
AKILSDDDRN RIIDIARITL APFQSPPDED NGITSTPSN

« Hide

References

[1]

"Complete sequence of Psychromonas ingrahamii 37."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F.

Richardson P.
Submitted (JAN-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 37.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000510 Genomic DNA. Translation: ABM02327.1.
RefSeq	YP_941926.1. NC_008709.1.
3D structure databases
ProteinModelPortal	A1SS62.
ModBase	Search...
Protein-protein interaction databases
STRING	A1SS62.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4626747.
GenomeReviews	Gene locus Ping_0470 in contig CP000510_GR.
KEGG	pin:Ping_0470.
PATRIC	23065699. VBIPsyIng103130_0508.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0056.
HOGENOM	HBG565875.
OMA	NVLCVYC.
ProtClustDB	PRK09281.
Enzyme and pathway databases
BioCyc	PING357804:PING_0470-MONOMER.
Family and domain databases
HAMAP	MF_01346. ATP_synth_alpha_bact. [Tree]
InterPro	IPR017710. Alt_ATPase_F1-cplx_asu. IPR020003. ATPase_a/bsu_AS. IPR005294. ATPase_F1-cplx_asu. IPR018118. ATPase_F1/A1-cplx_a/bsu_N. IPR023366. ATPase_F1/A1-cplx_a_su_N. IPR000793. ATPase_F1/V1/A1-cplx_a/bsu_C. IPR004100. ATPase_F1/V1/A1-cplx_a/bsu_N. IPR000194. ATPase_F1/V1/A1_a/bsu_nucl-bd. [Graphical view]
Gene3D	G3DSA:2.40.30.20. G3DSA:2.40.30.20. 1 hit.
KO	K02111.
PANTHER	PTHR15184:SF3. ATPase_F1_a. 1 hit.
Pfam	PF00006. ATP-synt_ab. 1 hit. PF00306. ATP-synt_ab_C. 1 hit. PF02874. ATP-synt_ab_N. 1 hit. [Graphical view]
SUPFAM	SSF47917. ATPase_a/b_C. 1 hit. SSF50615. ATPase_a/b_N. 1 hit.
TIGRFAMs	TIGR03324. Alt_F1F0_F1_al. 1 hit. TIGR00962. AtpA. 1 hit.
PROSITE	PS00152. ATPASE_ALPHA_BETA. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

ATPA1_PSYIN

Accession

Primary (citable) accession number: A1SS62

Entry history

Integrated into UniProtKB/Swiss-Prot:	June 10, 2008
Last sequence update:	February 6, 2007
Last modified:	January 25, 2012
This is version 51 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents

Preferred order of sections

Names and origin

Protein attributes

General annotation (Comments)

Ontologies

Sequence annotation (Features)

Molecule processing

Regions

Sites

Sequences

References

Cross-references

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Enzyme and pathway databases

Family and domain databases

Entry information

Relevant documents