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A1SQZ3 (A1SQZ3_PSYIN) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Ping_0033 EMBL ABM01908.1
OrganismPsychromonas ingrahamii (strain 37) [Complete proteome] [HAMAP] EMBL ABM01908.1
Taxonomic identifier357804 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesPsychromonadaceaePsychromonas

Protein attributes

Sequence length599 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3333 Potential EMBL ABM01908.1
Chain34 – 599566 Potential EMBL ABM01908.1
PRO_5000206404

Sequences

Sequence LengthMass (Da)Tools
A1SQZ3 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: E25E811209947064

FASTA59967,218
        10         20         30         40         50         60 
MKTSFGIKFG ILMLFAMTAL VGSMLVFFYQ YSNTMMKKDL QDKILDVTRT GAFILKEEDR 

        70         80         90        100        110        120 
ELIETFRNQV YTLLPADYKD RVDRYINKEG KGELLDSDAY EQLQYEVDFH YIVQLLRRIK 

       130        140        150        160        170        180 
EGSKDQVNKL SLLPQKKIDE AGASKIAWTY LLVKIPDIPV EKSMMFLALS FYLADDNYAA 

       190        200        210        220        230        240 
TPISTLYTPD DASLTAIKGN IGISKDWYVG AESGNTVMSA VIPLKNEQGE VIAALGVDYL 

       250        260        270        280        290        300 
VGSFRERIAE QKFVSMIVFV VVVAIALVLI FFITAWISIP LSKLRIGAEQ LSKHDFEHRV 

       310        320        330        340        350        360 
DIKSNDEFGL LADTFNKVSD ELGKFTRDLD GIVKAKTAGL TKAREEVVAL NNILNQENAH 

       370        380        390        400        410        420 
LGAEVKNLIA LRERTLPYLN QKLKVNNYEI TFNYLPSQAV CGDFWQVKSD KECTDISFGF 

       430        440        450        460        470        480 
ISGYGLETAM MAMQIQSLFK VADGNNSKRL SVINDFLFEQ GDSINLKLLC KLLLLQINED 

       490        500        510        520        530        540 
NITLSGSGEP PIRFSPNQQA FIKLTGSLPL GVNRDITMES VQLSLHRGEG LLLYSAGFKL 

       550        560        570        580        590 
ALAHLAKSEG YELQAQDIIH LSGILGESSG NIMDKFTEQP WFDDFNQDIS FILINRKGS 

« Hide

References

[1]"Complete sequence of Psychromonas ingrahamii 37."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F. expand/collapse author list , Land M., Hauser L., Kyrpides N., Ivanova N., Staley J., Richardson P.
Submitted (JAN-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 37 EMBL ABM01908.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000510 Genomic DNA. Translation: ABM01908.1.
RefSeqYP_941507.1. NC_008709.1.

3D structure databases

ProteinModelPortalA1SQZ3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING357804.Ping_0033.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABM01908; ABM01908; Ping_0033.
GeneID4624963.
KEGGpin:Ping_0033.
PATRIC23064714. VBIPsyIng103130_0035.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2208.
OrthoDBEOG6S7XQP.

Enzyme and pathway databases

BioCycPING357804:GJBJ-38-MONOMER.

Family and domain databases

InterProIPR003660. HAMP_linker_domain.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTSM00304. HAMP. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
PROSITEPS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA1SQZ3_PSYIN
AccessionPrimary (citable) accession number: A1SQZ3
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: May 14, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)