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Protein
Submitted name:

Putative sensor with HAMP domain

Gene

Ping_0033

Organism
Psychromonas ingrahamii (strain 37)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Enzyme and pathway databases

BioCyciPING357804:GJBJ-38-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative sensor with HAMP domainImported
Gene namesi
Ordered Locus Names:Ping_0033Imported
OrganismiPsychromonas ingrahamii (strain 37)Imported
Taxonomic identifieri357804 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesPsychromonadaceaePsychromonas
Proteomesi
  • UP000000639 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei6 – 29HelicalSequence analysisAdd BLAST24
Transmembranei253 – 277HelicalSequence analysisAdd BLAST25

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi357804.Ping_0033.

Structurei

3D structure databases

ProteinModelPortaliA1SQZ3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini275 – 327HAMPInterPro annotationAdd BLAST53

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4107W0N. Bacteria.
COG2208. LUCA.
OrthoDBiPOG091H03PP.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiView protein in InterPro
IPR003660. HAMP_dom.
IPR001932. PPM-type_phosphatase_dom.
PfamiView protein in Pfam
PF07228. SpoIIE. 1 hit.
SMARTiView protein in SMART
SM00304. HAMP. 1 hit.
PROSITEiView protein in PROSITE
PS50885. HAMP. 1 hit.

Sequencei

Sequence statusi: Complete.

A1SQZ3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKTSFGIKFG ILMLFAMTAL VGSMLVFFYQ YSNTMMKKDL QDKILDVTRT
60 70 80 90 100
GAFILKEEDR ELIETFRNQV YTLLPADYKD RVDRYINKEG KGELLDSDAY
110 120 130 140 150
EQLQYEVDFH YIVQLLRRIK EGSKDQVNKL SLLPQKKIDE AGASKIAWTY
160 170 180 190 200
LLVKIPDIPV EKSMMFLALS FYLADDNYAA TPISTLYTPD DASLTAIKGN
210 220 230 240 250
IGISKDWYVG AESGNTVMSA VIPLKNEQGE VIAALGVDYL VGSFRERIAE
260 270 280 290 300
QKFVSMIVFV VVVAIALVLI FFITAWISIP LSKLRIGAEQ LSKHDFEHRV
310 320 330 340 350
DIKSNDEFGL LADTFNKVSD ELGKFTRDLD GIVKAKTAGL TKAREEVVAL
360 370 380 390 400
NNILNQENAH LGAEVKNLIA LRERTLPYLN QKLKVNNYEI TFNYLPSQAV
410 420 430 440 450
CGDFWQVKSD KECTDISFGF ISGYGLETAM MAMQIQSLFK VADGNNSKRL
460 470 480 490 500
SVINDFLFEQ GDSINLKLLC KLLLLQINED NITLSGSGEP PIRFSPNQQA
510 520 530 540 550
FIKLTGSLPL GVNRDITMES VQLSLHRGEG LLLYSAGFKL ALAHLAKSEG
560 570 580 590
YELQAQDIIH LSGILGESSG NIMDKFTEQP WFDDFNQDIS FILINRKGS
Length:599
Mass (Da):67,218
Last modified:February 6, 2007 - v1
Checksum:iE25E811209947064
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000510 Genomic DNA. Translation: ABM01908.1.
RefSeqiWP_011768467.1. NC_008709.1.

Genome annotation databases

EnsemblBacteriaiABM01908; ABM01908; Ping_0033.
KEGGipin:Ping_0033.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiA1SQZ3_PSYIN
AccessioniPrimary (citable) accession number: A1SQZ3
Entry historyiIntegrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: June 7, 2017
This is version 57 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported