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A1SQ24

- DCD_NOCSJ

UniProt

A1SQ24 - DCD_NOCSJ

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Protein
Deoxycytidine triphosphate deaminase
Gene
dcd, Noca_4412
Organism
Nocardioides sp. (strain BAA-499 / JS614)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

dCTP + H2O = dUTP + NH3.UniRule annotation

Pathwayi

GO - Molecular functioni

  1. dCTP deaminase activity Source: UniProtKB-HAMAP
Complete GO annotation...

GO - Biological processi

  1. dUMP biosynthetic process Source: UniProtKB-UniPathway
  2. dUTP biosynthetic process Source: InterPro
  3. pyrimidine ribonucleotide biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

Nucleotide metabolism

Enzyme and pathway databases

BioCyciNSP196162:GH4V-4466-MONOMER.
UniPathwayiUPA00610; UER00665.

Names & Taxonomyi

Protein namesi
Recommended name:
Deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Short name:
dCTP deaminase
Gene namesi
Name:dcd
Ordered Locus Names:Noca_4412
OrganismiNocardioides sp. (strain BAA-499 / JS614)
Taxonomic identifieri196162 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPropionibacterineaeNocardioidaceaeNocardioides
ProteomesiUP000000640: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 191191Deoxycytidine triphosphate deaminaseUniRule annotation
PRO_1000009775Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi196162.Noca_4412.

Structurei

3D structure databases

ProteinModelPortaliA1SQ24.
SMRiA1SQ24. Positions 1-189.

Family & Domainsi

Sequence similaritiesi

Belongs to the dCTP deaminase family.

Phylogenomic databases

eggNOGiCOG0717.
HOGENOMiHOG000228601.
KOiK01494.
OMAiRPGMMIG.
OrthoDBiEOG67DPKR.

Family and domain databases

Gene3Di2.70.40.10. 1 hit.
HAMAPiMF_00146. dCTP_deaminase.
InterProiIPR011962. dCTP_deam.
IPR029054. dUTPase-like.
IPR008180. dUTPase/dCTP_deaminase.
[Graphical view]
PfamiPF00692. dUTPase. 1 hit.
[Graphical view]
SUPFAMiSSF51283. SSF51283. 1 hit.
TIGRFAMsiTIGR02274. dCTP_deam. 1 hit.

Sequencei

Sequence statusi: Complete.

A1SQ24-1 [UniParc]FASTAAdd to Basket

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MLLSDRDILV EIDAGRVALE PYDPGMLQPS SIDVRLDRFF RVFENHKYPH    50
IDPAADQSDL TRMVEPEGDE PFILHPGEFV LGSTYEVVTL PDDIAARVEG 100
KSSLGRLGLL THATAGFVDP GFSGHVTLEL ANVATLPIKL YPGMKIGQFC 150
FFRLSSPSEH PYGSAKYGSR YQGQRGPTPS RSYQNFHRTP I 191
Length:191
Mass (Da):21,206
Last modified:February 6, 2007 - v1
Checksum:iFF113477C501C7BE
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000509 Genomic DNA. Translation: ABL83909.1.
RefSeqiWP_011757838.1. NC_008699.1.
YP_925596.1. NC_008699.1.

Genome annotation databases

EnsemblBacteriaiABL83909; ABL83909; Noca_4412.
GeneIDi4596930.
KEGGinca:Noca_4412.
PATRICi22750973. VBINocSp122728_4713.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000509 Genomic DNA. Translation: ABL83909.1 .
RefSeqi WP_011757838.1. NC_008699.1.
YP_925596.1. NC_008699.1.

3D structure databases

ProteinModelPortali A1SQ24.
SMRi A1SQ24. Positions 1-189.
ModBasei Search...

Protein-protein interaction databases

STRINGi 196162.Noca_4412.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABL83909 ; ABL83909 ; Noca_4412 .
GeneIDi 4596930.
KEGGi nca:Noca_4412.
PATRICi 22750973. VBINocSp122728_4713.

Phylogenomic databases

eggNOGi COG0717.
HOGENOMi HOG000228601.
KOi K01494.
OMAi RPGMMIG.
OrthoDBi EOG67DPKR.

Enzyme and pathway databases

UniPathwayi UPA00610 ; UER00665 .
BioCyci NSP196162:GH4V-4466-MONOMER.

Family and domain databases

Gene3Di 2.70.40.10. 1 hit.
HAMAPi MF_00146. dCTP_deaminase.
InterProi IPR011962. dCTP_deam.
IPR029054. dUTPase-like.
IPR008180. dUTPase/dCTP_deaminase.
[Graphical view ]
Pfami PF00692. dUTPase. 1 hit.
[Graphical view ]
SUPFAMi SSF51283. SSF51283. 1 hit.
TIGRFAMsi TIGR02274. dCTP_deam. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome 1 of Nocardioides sp. JS614."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F.
    , Land M., Hauser L., Kyrpides N., Kim E., Mattes T., Gossett J., Richardson P.
    Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BAA-499 / JS614.

Entry informationi

Entry nameiDCD_NOCSJ
AccessioniPrimary (citable) accession number: A1SQ24
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: February 6, 2007
Last modified: September 3, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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