A1SMF0 (A1SMF0_NOCSJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine racemase EMBL ABL82985.1
EC=5.1.1.1 EMBL ABL82985.1

Gene names

Ordered Locus Names:

Noca_3485 EMBL ABL82985.1

Organism

Nocardioides sp. (strain BAA-499 / JS614) [Complete proteome] [HAMAP] EMBL ABL82985.1

Taxonomic identifier

196162 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Propionibacterineae › Nocardioidaceae › Nocardioides

Protein attributes

Sequence length	380 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. SAAS SAAS011079
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS011079
Molecular function	Isomerase SAAS SAAS011079 EMBL ABL82985.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	alanine metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1SMF0 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: C7B2AB9641F4F2A7	FASTA	380	39,731
	10 20 30 40 50 60 MTILLADRQR TGAGPRPDID LAAVAHNTRL LAGRATGELM AVVKADDFGH GAVELARTAL 70 80 90 100 110 120 ANGATWLGVT TIDEALALRA AGLTAPLLSW LNPVDADLAA AVRAGVDLGV PGLPHLDATT 130 140 150 160 170 180 AARGARVHLH VDAGMARDGA APATWGQLCR AARRAEQRGE IQVVGVMGHL GCAEDPTDEC 190 200 210 220 230 240 NALGRTRFAW ALETARAAGL RPAHRHLAAT AATLTDPRSH HTMSRVGAGL VGIDPSHTTR 250 260 270 280 290 300 LRPALTLIAP VVQVRRVRGG TPVGYGHAYR TSAATHLGLV PLGYADGLPR LASGRAEVLV 310 320 330 340 350 360 RGRRRPVVGR ISMDQLVVDL GERPVDVGEG VTVFGPGDAG EPTVAEWAAW SETIEHEIVT 370 380 GIGARVPRRI GRSAHLRSLS

References

[1]

"Complete sequence of chromosome 1 of Nocardioides sp. JS614." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F. , Land M., Hauser L., Kyrpides N., Kim E., Mattes T., Gossett J., Richardson P. Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BAA-499 / JS614.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000509 Genomic DNA. Translation: ABL82985.1.
RefSeq	YP_924672.1. NC_008699.1.
3D structure databases
ProteinModelPortal	A1SMF0.
ModBase	Search...
Protein-protein interaction databases
STRING	196162.Noca_3485.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABL82985; ABL82985; Noca_3485.
GeneID	4595584.
KEGG	nca:Noca_3485.
PATRIC	22749083. VBINocSp122728_3773.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0787.
HOGENOM	HOG000031444.
KO	K01775.
OMA	KNPMEPV.
ProtClustDB	CLSK2783712.
Enzyme and pathway databases
BioCyc	NSP196162:GH4V-3540-MONOMER.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A1SMF0_NOCSJ

Accession

Primary (citable) accession number: A1SMF0

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	May 1, 2013
This is version 54 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)