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A1SLX7

- A1SLX7_NOCSJ

UniProt

A1SLX7 - A1SLX7_NOCSJ

Protein
Submitted name:

Regulatory protein, LuxR

Gene

Noca_3310

Organism
Nocardioides sp. (strain BAA-499 / JS614)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 54 (01 Oct 2014)
      Sequence version 1 (06 Feb 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: UniProtKB-KW
    2. metal ion binding Source: InterPro
    3. phosphoric diester hydrolase activity Source: InterPro
    4. sequence-specific DNA binding transcription factor activity Source: InterPro

    GO - Biological processi

    1. transcription, DNA-templated Source: UniProtKB-KW

    Keywords - Biological processi

    Transcription, Transcription regulationUniRule annotation

    Keywords - Ligandi

    DNA-bindingUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciNSP196162:GH4V-3355-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Regulatory protein, LuxRImported
    Gene namesi
    Ordered Locus Names:Noca_3310Imported
    OrganismiNocardioides sp. (strain BAA-499 / JS614)Imported
    Taxonomic identifieri196162 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPropionibacterineaeNocardioidaceaeNocardioides
    ProteomesiUP000000640: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi196162.Noca_3310.

    Structurei

    3D structure databases

    ProteinModelPortaliA1SLX7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains 1 HTH luxR-type DNA-binding domain.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG2771.
    HOGENOMiHOG000268981.
    OMAiFANARGH.
    OrthoDBiEOG6G4VQG.

    Family and domain databases

    Gene3Di1.10.10.10. 1 hit.
    1.10.3210.10. 1 hit.
    InterProiIPR003607. HD/PDEase_dom.
    IPR006674. HD_domain.
    IPR016032. Sig_transdc_resp-reg_C-effctor.
    IPR000792. Tscrpt_reg_LuxR_C.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view]
    PfamiPF00196. GerE. 1 hit.
    [Graphical view]
    PRINTSiPR00038. HTHLUXR.
    SMARTiSM00471. HDc. 1 hit.
    SM00421. HTH_LUXR. 1 hit.
    [Graphical view]
    SUPFAMiSSF46894. SSF46894. 1 hit.
    PROSITEiPS50043. HTH_LUXR_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A1SLX7-1 [UniParc]FASTAAdd to Basket

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    MTLAELLAAY SLATDLGLGQ PMEHLLRSWR IAARLGTHVG LPDGEQAALF    50
    YVAMLSWVGC VADAPEVAAT FGDDISFRSD SYDVDLGGMA AYRFFLGHAG 100
    AGASATARAR VVATLLATGG RRVMRGIQAH CLITSTLAER LGLDDAVSAA 150
    VRQFFARWDG QGVPPHVGGE DLSPWVRLFH VGDITEVYHR NGGVEAAVRV 200
    ARERRGRQFD PALADAFCEI APEVLPALGE DDDLRGMLAD EPALRRCLSG 250
    PELDEALAAL ADFTDLRSPN RAGHSSGVAE LAGSAASCLG LPAVDVAASR 300
    RAGYLHDIGL HGVPSTILDK PGALSATEWE RVRVSSYYTE RVLAQPAPLA 350
    RIGAIASYTN ERMDGSGYHR GASGASIPMA GRVLAAACAL RTLTEPRVGR 400
    PPKSVKDAAT ELRSEVRAGR LDVDATDAVL SAAGAGGRRR VAGPAGLTQR 450
    EVEVLVLIAR GVATNEVAAR LGVSRKTAAT HIERIYAKTG ACSRSTATLF 500
    ALRNGLLDPL AT 512
    Length:512
    Mass (Da):53,840
    Last modified:February 6, 2007 - v1
    Checksum:i71966357514FE262
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000509 Genomic DNA. Translation: ABL82812.1.
    RefSeqiWP_011756746.1. NC_008699.1.
    YP_924499.1. NC_008699.1.

    Genome annotation databases

    EnsemblBacteriaiABL82812; ABL82812; Noca_3310.
    GeneIDi4600202.
    KEGGinca:Noca_3310.
    PATRICi22748707. VBINocSp122728_3587.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000509 Genomic DNA. Translation: ABL82812.1 .
    RefSeqi WP_011756746.1. NC_008699.1.
    YP_924499.1. NC_008699.1.

    3D structure databases

    ProteinModelPortali A1SLX7.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 196162.Noca_3310.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABL82812 ; ABL82812 ; Noca_3310 .
    GeneIDi 4600202.
    KEGGi nca:Noca_3310.
    PATRICi 22748707. VBINocSp122728_3587.

    Phylogenomic databases

    eggNOGi COG2771.
    HOGENOMi HOG000268981.
    OMAi FANARGH.
    OrthoDBi EOG6G4VQG.

    Enzyme and pathway databases

    BioCyci NSP196162:GH4V-3355-MONOMER.

    Family and domain databases

    Gene3Di 1.10.10.10. 1 hit.
    1.10.3210.10. 1 hit.
    InterProi IPR003607. HD/PDEase_dom.
    IPR006674. HD_domain.
    IPR016032. Sig_transdc_resp-reg_C-effctor.
    IPR000792. Tscrpt_reg_LuxR_C.
    IPR011991. WHTH_DNA-bd_dom.
    [Graphical view ]
    Pfami PF00196. GerE. 1 hit.
    [Graphical view ]
    PRINTSi PR00038. HTHLUXR.
    SMARTi SM00471. HDc. 1 hit.
    SM00421. HTH_LUXR. 1 hit.
    [Graphical view ]
    SUPFAMi SSF46894. SSF46894. 1 hit.
    PROSITEi PS50043. HTH_LUXR_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome 1 of Nocardioides sp. JS614."
      Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F.
      , Land M., Hauser L., Kyrpides N., Kim E., Mattes T., Gossett J., Richardson P.
      Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BAA-499 / JS614Imported.

    Entry informationi

    Entry nameiA1SLX7_NOCSJ
    AccessioniPrimary (citable) accession number: A1SLX7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 6, 2007
    Last sequence update: February 6, 2007
    Last modified: October 1, 2014
    This is version 54 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3