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A1SLX7

- A1SLX7_NOCSJ

UniProt

A1SLX7 - A1SLX7_NOCSJ

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Protein
Submitted name:

Regulatory protein, LuxR

Gene
Noca_3310
Organism
Nocardioides sp. (strain BAA-499 / JS614)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. metal ion binding Source: InterPro
  3. phosphoric diester hydrolase activity Source: InterPro
  4. sequence-specific DNA binding transcription factor activity Source: InterPro

GO - Biological processi

  1. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciNSP196162:GH4V-3355-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Regulatory protein, LuxRImported
Gene namesi
Ordered Locus Names:Noca_3310Imported
OrganismiNocardioides sp. (strain BAA-499 / JS614)Imported
Taxonomic identifieri196162 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPropionibacterineaeNocardioidaceaeNocardioides
ProteomesiUP000000640: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi196162.Noca_3310.

Structurei

3D structure databases

ProteinModelPortaliA1SLX7.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG2771.
HOGENOMiHOG000268981.
OMAiFANARGH.
OrthoDBiEOG6G4VQG.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProiIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
PROSITEiPS50043. HTH_LUXR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A1SLX7-1 [UniParc]FASTAAdd to Basket

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MTLAELLAAY SLATDLGLGQ PMEHLLRSWR IAARLGTHVG LPDGEQAALF    50
YVAMLSWVGC VADAPEVAAT FGDDISFRSD SYDVDLGGMA AYRFFLGHAG 100
AGASATARAR VVATLLATGG RRVMRGIQAH CLITSTLAER LGLDDAVSAA 150
VRQFFARWDG QGVPPHVGGE DLSPWVRLFH VGDITEVYHR NGGVEAAVRV 200
ARERRGRQFD PALADAFCEI APEVLPALGE DDDLRGMLAD EPALRRCLSG 250
PELDEALAAL ADFTDLRSPN RAGHSSGVAE LAGSAASCLG LPAVDVAASR 300
RAGYLHDIGL HGVPSTILDK PGALSATEWE RVRVSSYYTE RVLAQPAPLA 350
RIGAIASYTN ERMDGSGYHR GASGASIPMA GRVLAAACAL RTLTEPRVGR 400
PPKSVKDAAT ELRSEVRAGR LDVDATDAVL SAAGAGGRRR VAGPAGLTQR 450
EVEVLVLIAR GVATNEVAAR LGVSRKTAAT HIERIYAKTG ACSRSTATLF 500
ALRNGLLDPL AT 512
Length:512
Mass (Da):53,840
Last modified:February 6, 2007 - v1
Checksum:i71966357514FE262
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000509 Genomic DNA. Translation: ABL82812.1.
RefSeqiWP_011756746.1. NC_008699.1.
YP_924499.1. NC_008699.1.

Genome annotation databases

EnsemblBacteriaiABL82812; ABL82812; Noca_3310.
GeneIDi4600202.
KEGGinca:Noca_3310.
PATRICi22748707. VBINocSp122728_3587.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000509 Genomic DNA. Translation: ABL82812.1 .
RefSeqi WP_011756746.1. NC_008699.1.
YP_924499.1. NC_008699.1.

3D structure databases

ProteinModelPortali A1SLX7.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 196162.Noca_3310.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABL82812 ; ABL82812 ; Noca_3310 .
GeneIDi 4600202.
KEGGi nca:Noca_3310.
PATRICi 22748707. VBINocSp122728_3587.

Phylogenomic databases

eggNOGi COG2771.
HOGENOMi HOG000268981.
OMAi FANARGH.
OrthoDBi EOG6G4VQG.

Enzyme and pathway databases

BioCyci NSP196162:GH4V-3355-MONOMER.

Family and domain databases

Gene3Di 1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProi IPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view ]
Pfami PF00196. GerE. 1 hit.
[Graphical view ]
PRINTSi PR00038. HTHLUXR.
SMARTi SM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view ]
SUPFAMi SSF46894. SSF46894. 1 hit.
PROSITEi PS50043. HTH_LUXR_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome 1 of Nocardioides sp. JS614."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F.
    , Land M., Hauser L., Kyrpides N., Kim E., Mattes T., Gossett J., Richardson P.
    Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BAA-499 / JS614.

Entry informationi

Entry nameiA1SLX7_NOCSJ
AccessioniPrimary (citable) accession number: A1SLX7
Entry historyi
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: September 3, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3