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A1SL75 (A1SL75_NOCSJ) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Alanine racemase domain protein EMBL ABL82560.1
Gene names
Ordered Locus Names:Noca_3058
OrganismNocardioides sp. (strain BAA-499 / JS614) [Complete proteome] [HAMAP]
Taxonomic identifier196162 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Propionibacterineae › Nocardioidaceae › Nocardioides

Protein attributes

Sequence length234 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. PIRSR PIRSR004848-1

Sequence similarities

Belongs to the UPF0001 family. RuleBase RU004514

Ontologies

Keywords
   LigandPyridoxal phosphate PIRSR PIRSR004848-1
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Amino acid modifications

Modified residue411N6-(pyridoxal phosphate)lysine By similarity PIRSR PIRSR004848-1

Sequences

Sequence LengthMass (Da)Tools
A1SL75 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: DDB9D93A1B1A994D

FASTA23424,773
        10         20         30         40         50         60 
MSNERRDQLA ANLETVRDRI AAACADAGRD PADVRLVVVT KFFPASDVRL LAELGVTDVG 

        70         80         90        100        110        120 
ENRHQEAESK AAECADLGLR WHFIGGLQSN KAAAVAEYAD VVESVDRLKL VGPLGRGAQR 

       130        140        150        160        170        180 
RDVPVEVLLQ VSLDPPGAEG RSGADPADLP ALAGAVEQAA GLRLRGLMAV APLGEDPAAA 

       190        200        210        220        230 
FARLADLRRD FLLERPDATW LSAGMSADLE DAVRVGATHV RIGSAVLGSR PRFK

« Hide

References

[1]"Complete sequence of chromosome 1 of Nocardioides sp. JS614."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F. expand/collapse author list , Land M., Hauser L., Kyrpides N., Kim E., Mattes T., Gossett J., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BAA-499 / JS614.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000509 Genomic DNA. Translation: ABL82560.1.
RefSeqYP_924247.1. NC_008699.1.

3D structure databases

ProteinModelPortalA1SL75.
ModBaseSearch...

Protein-protein interaction databases

STRINGA1SL75.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4600175.
GenomeReviewsGene locus Noca_3058 in contig CP000509_GR.
KEGGnca:Noca_3058.
PATRIC22748187. VBINocSp122728_3327.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0325.
HOGENOMHBG289671.
OMAHGSTMVR.
PhylomeDBA1SL75.

Enzyme and pathway databases

BioCycNSP35761:NOCA_3058-MONOMER.

Family and domain databases

InterProIPR001608. Ala_racemase_N.
IPR011078. UPF0001.
[Graphical view]
KOK06997.
PANTHERPTHR10146. PP_YBL036C. 1 hit.
PfamPF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PIRSFPIRSF004848. YBL036c_PLPDEIII. 1 hit.
TIGRFAMsTIGR00044. TIGR00044. 1 hit.
PROSITEPS01211. UPF0001. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA1SL75_NOCSJ
AccessionPrimary (citable) accession number: A1SL75
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: December 14, 2011
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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