ID   A1SJG4_NOCSJ            Unreviewed;       326 AA.
AC   A1SJG4;
DT   06-FEB-2007, integrated into UniProtKB/TrEMBL.
DT   06-FEB-2007, sequence version 1.
DT   27-MAR-2024, entry version 69.
DE   SubName: Full=Putative DNA ligase (ATP), C-terminal {ECO:0000313|EMBL:ABL81949.1};
GN   OrderedLocusNames=Noca_2445 {ECO:0000313|EMBL:ABL81949.1};
OS   Nocardioides sp. (strain ATCC BAA-499 / JS614).
OC   Bacteria; Actinomycetota; Actinomycetes; Propionibacteriales;
OC   Nocardioidaceae; Nocardioides.
OX   NCBI_TaxID=196162 {ECO:0000313|EMBL:ABL81949.1, ECO:0000313|Proteomes:UP000000640};
RN   [1] {ECO:0000313|Proteomes:UP000000640}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-499 / JS614 {ECO:0000313|Proteomes:UP000000640};
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA   Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J.,
RA   Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Mattes T., Gossett J.,
RA   Richardson P.;
RT   "Complete sequence of chromosome 1 of Nocardioides sp. JS614.";
RL   Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ABL81949.1, ECO:0000313|Proteomes:UP000000640}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-499 / JS614 {ECO:0000313|Proteomes:UP000000640};
RX   PubMed=21551312; DOI=10.1128/JB.05109-11;
RA   Coleman N.V., Wilson N.L., Barry K., Brettin T.S., Bruce D.C., Copeland A.,
RA   Dalin E., Detter J.C., Del Rio T.G., Goodwin L.A., Hammon N.M., Han S.,
RA   Hauser L.J., Israni S., Kim E., Kyrpides N., Land M.L., Lapidus A.,
RA   Larimer F.W., Lucas S., Pitluck S., Richardson P., Schmutz J., Tapia R.,
RA   Thompson S., Tice H.N., Spain J.C., Gossett J.G., Mattes T.E.;
RT   "Genome Sequence of the ethene- and vinyl chloride-oxidizing actinomycete
RT   Nocardioides sp. strain JS614.";
RL   J. Bacteriol. 193:3399-3400(2011).
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DR   EMBL; CP000509; ABL81949.1; -; Genomic_DNA.
DR   RefSeq; WP_011755890.1; NC_008699.1.
DR   AlphaFoldDB; A1SJG4; -.
DR   STRING; 196162.Noca_2445; -.
DR   KEGG; nca:Noca_2445; -.
DR   eggNOG; COG3285; Bacteria.
DR   HOGENOM; CLU_008325_1_0_11; -.
DR   OrthoDB; 4296267at2; -.
DR   Proteomes; UP000000640; Chromosome.
DR   GO; GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
DR   Gene3D; 3.90.920.10; DNA primase, PRIM domain; 1.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   NCBIfam; TIGR02778; ligD_pol; 1.
DR   PANTHER; PTHR42705:SF3; -; 1.
DR   PANTHER; PTHR42705; BIFUNCTIONAL NON-HOMOLOGOUS END JOINING PROTEIN LIGD; 1.
DR   Pfam; PF21686; LigD_Prim-Pol; 1.
PE   4: Predicted;
KW   Ligase {ECO:0000313|EMBL:ABL81949.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000640}.
FT   DOMAIN          34..288
FT                   /note="DNA ligase D polymerase"
FT                   /evidence="ECO:0000259|Pfam:PF21686"
SQ   SEQUENCE   326 AA;  37083 MW;  27BA5CD135D5F7D6 CRC64;
     MPASKTPAVE IEVDDRVVRI SNPDRVYFPD SGATKLDLVE YYLAVGPGIV NALFERPCML
     HRFPKGLAGE KVHQKRLPKG APPWVETVRL HFPRWNRTAD ELCVTELGSV IWAVQMSTVE
     FHPWNSRRED TERPDEWRID LDPGPECSYD RVRRVAHVAH EVLDELGVVG FPKTSGSKGL
     HVYVRIRPDH GFKEVRRAAL AFAREVERRA PEDVDLTWWR KDRDPATVFV DYNQNARDHT
     IAAAYSVRGL PDARVSTPIR WDEVDDADPR DFTIFTVPER FARLGDLHTD IDDGGGRGPF
     DIASLLEWAD RDERDGAAGP DDEQSE
//