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A1SJG4

- A1SJG4_NOCSJ

UniProt

A1SJG4 - A1SJG4_NOCSJ

Protein
Submitted name:

Putative DNA ligase (ATP), C-terminal

Gene

Noca_2445

Organism
Nocardioides sp. (strain BAA-499 / JS614)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 37 (01 Oct 2014)
      Sequence version 1 (06 Feb 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA primase activity Source: InterPro
    2. ligase activity Source: UniProtKB-KW

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciNSP196162:GH4V-2484-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative DNA ligase (ATP), C-terminalImported
    Gene namesi
    Ordered Locus Names:Noca_2445Imported
    OrganismiNocardioides sp. (strain BAA-499 / JS614)Imported
    Taxonomic identifieri196162 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPropionibacterineaeNocardioidaceaeNocardioides
    ProteomesiUP000000640: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi196162.Noca_2445.

    Structurei

    3D structure databases

    ProteinModelPortaliA1SJG4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3285.
    HOGENOMiHOG000244654.
    KOiK01971.
    OMAiPDEWRID.
    OrthoDBiEOG6FV833.

    Family and domain databases

    InterProiIPR002755. DNA_primase_S.
    IPR014145. LigD_pol.
    [Graphical view]
    PfamiPF01896. DNA_primase_S. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A1SJG4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPASKTPAVE IEVDDRVVRI SNPDRVYFPD SGATKLDLVE YYLAVGPGIV    50
    NALFERPCML HRFPKGLAGE KVHQKRLPKG APPWVETVRL HFPRWNRTAD 100
    ELCVTELGSV IWAVQMSTVE FHPWNSRRED TERPDEWRID LDPGPECSYD 150
    RVRRVAHVAH EVLDELGVVG FPKTSGSKGL HVYVRIRPDH GFKEVRRAAL 200
    AFAREVERRA PEDVDLTWWR KDRDPATVFV DYNQNARDHT IAAAYSVRGL 250
    PDARVSTPIR WDEVDDADPR DFTIFTVPER FARLGDLHTD IDDGGGRGPF 300
    DIASLLEWAD RDERDGAAGP DDEQSE 326
    Length:326
    Mass (Da):37,083
    Last modified:February 6, 2007 - v1
    Checksum:i27BA5CD135D5F7D6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000509 Genomic DNA. Translation: ABL81949.1.
    RefSeqiWP_011755890.1. NC_008699.1.
    YP_923636.1. NC_008699.1.

    Genome annotation databases

    EnsemblBacteriaiABL81949; ABL81949; Noca_2445.
    GeneIDi4599786.
    KEGGinca:Noca_2445.
    PATRICi22746921. VBINocSp122728_2700.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000509 Genomic DNA. Translation: ABL81949.1 .
    RefSeqi WP_011755890.1. NC_008699.1.
    YP_923636.1. NC_008699.1.

    3D structure databases

    ProteinModelPortali A1SJG4.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 196162.Noca_2445.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABL81949 ; ABL81949 ; Noca_2445 .
    GeneIDi 4599786.
    KEGGi nca:Noca_2445.
    PATRICi 22746921. VBINocSp122728_2700.

    Phylogenomic databases

    eggNOGi COG3285.
    HOGENOMi HOG000244654.
    KOi K01971.
    OMAi PDEWRID.
    OrthoDBi EOG6FV833.

    Enzyme and pathway databases

    BioCyci NSP196162:GH4V-2484-MONOMER.

    Family and domain databases

    InterProi IPR002755. DNA_primase_S.
    IPR014145. LigD_pol.
    [Graphical view ]
    Pfami PF01896. DNA_primase_S. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome 1 of Nocardioides sp. JS614."
      Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F.
      , Land M., Hauser L., Kyrpides N., Kim E., Mattes T., Gossett J., Richardson P.
      Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BAA-499 / JS614Imported.

    Entry informationi

    Entry nameiA1SJG4_NOCSJ
    AccessioniPrimary (citable) accession number: A1SJG4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 6, 2007
    Last sequence update: February 6, 2007
    Last modified: October 1, 2014
    This is version 37 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3