A1SJE5 (A1SJE5_NOCSJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Ornithine carbamoyltransferase 1 HAMAP MF_01109
Short name=OTCase 1 HAMAP MF_01109
EC=2.1.3.3 HAMAP MF_01109

Gene names

Name:	argF1 HAMAP MF_01109
Ordered Locus Names:	Noca_2425

Organism

Nocardioides sp. (strain BAA-499 / JS614) [Complete proteome] [HAMAP]

Taxonomic identifier

196162 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Propionibacterineae › Nocardioidaceae › Nocardioides

Protein attributes

Sequence length	334 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Carbamoyl phosphate + L-ornithine = phosphate + L-citrulline. SAAS SAAS002292 HAMAP MF_01109
Pathway	Amino-acid biosynthesis; L-arginine biosynthesis; L-arginine from L-ornithine and carbamoyl phosphate: step 1/3. HAMAP MF_01109
Subcellular location	Cytoplasm By similarity HAMAP MF_01109 SAAS SAAS002292.
Sequence similarities	Belongs to the ATCase/OTCase family. RuleBase RU003634 HAMAP MF_01109

Ontologies

Keywords
Biological process	Amino-acid biosynthesis Arginine biosynthesis HAMAP MF_01109
Cellular component	Cytoplasm SAAS SAAS002292 HAMAP MF_01109
Molecular function	Transferase SAAS SAAS002292 RuleBase RU003634 HAMAP MF_01109 EMBL ABL81930.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	arginine biosynthetic process Inferred from electronic annotation. Source: HAMAP
Cellular component	ornithine carbamoyltransferase complex Inferred from electronic annotation. Source: InterPro
Molecular function	amino acid binding Inferred from electronic annotation. Source: InterPro ornithine carbamoyltransferase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1SJE5 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: D47895F17D2CE5BD	FASTA	334	37,179
	10 20 30 40 50 60 MPVNLRGRHL LSLRHHSADE IRYLLDLSRD LKRAKYAGSE RQLLQGRNVA LIFEKTSTRT 70 80 90 100 110 120 RCAFEVASYD QGAHVTYIDP ASSQLGHKES VKDTARVLGR MYDAIEYRGF SQQVVEELAE 130 140 150 160 170 180 YAGVPVFNGL TDEFHPTQML ADVLTMREHC DKPLHEIAFA FMGDGRNNVA NSLLLVAAKL 190 200 210 220 230 240 GMDVRIGAPK ELWPEDELVK LCHDLADVSG ARITITDDPT QAVAGVDFIY TDVWVSMGEP 250 260 270 280 290 300 VESWAERVER CLPFQVNADL LHATGNARVK VLHCLPAFHN TETKVGHQVV AQYPQLANGI 310 320 330 EVTEDVFESA ANISFDQAEN RMHTIKALLV ASLA

References

[1]

"Complete sequence of chromosome 1 of Nocardioides sp. JS614." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F. , Land M., Hauser L., Kyrpides N., Kim E., Mattes T., Gossett J., Richardson P. Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BAA-499 / JS614.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000509 Genomic DNA. Translation: ABL81930.1.
RefSeq	YP_923617.1. NC_008699.1.
3D structure databases
ProteinModelPortal	A1SJE5.
SMR	A1SJE5. Positions 4-334.
ModBase	Search...
Protein-protein interaction databases
STRING	A1SJE5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4598261.
GenomeReviews	Gene locus Noca_2425 in contig CP000509_GR.
KEGG	nca:Noca_2425.
PATRIC	22746879. VBINocSp122728_2679.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0078.
HOGENOM	HBG579429.
OMA	MTPYQIN.
PhylomeDB	A1SJE5.
Enzyme and pathway databases
BioCyc	NSP35761:NOCA_2425-MONOMER.
Family and domain databases
HAMAP	MF_01109. OTCase. [Tree]
InterPro	IPR006132. Asp/Orn_carbamoyltranf_P-bd. IPR006130. Asp/Orn_carbamoylTrfase. IPR006131. Asp_carbamoyltransf_Asp/Orn-bd. IPR002292. Orn/put_carbamltrans. IPR024904. Orn_carbamltrans. [Graphical view]
KO	K00611.
Pfam	PF00185. OTCace. 1 hit. PF02729. OTCace_N. 1 hit. [Graphical view]
PRINTS	PR00100. AOTCASE. PR00102. OTCASE.
SUPFAM	SSF53671. Asp/Orn_carbamoyltranf. 1 hit.
TIGRFAMs	TIGR00658. Orni_carb_tr. 1 hit.
PROSITE	PS00097. CARBAMOYLTRANSFERASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A1SJE5_NOCSJ

Accession

Primary (citable) accession number: A1SJE5

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	January 25, 2012
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)