A1SJD8 (NUSB_NOCSJ) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
N utilization substance protein B homolog
Short name=Protein NusB

Gene names

Name:	nusB
Ordered Locus Names:	Noca_2418

Organism

Nocardioides sp. (strain BAA-499 / JS614) [Complete proteome] [HAMAP]

Taxonomic identifier

196162 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Propionibacterineae › Nocardioidaceae › Nocardioides

Protein attributes

Sequence length	135 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Involved in the transcription termination process By similarity. HAMAP-Rule MF_00073
Sequence similarities	Belongs to the NusB family.

Ontologies

Keywords
Biological process	Transcription Transcription regulation Transcription termination
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA-dependent transcription, termination Inferred from electronic annotation. Source: HAMAP regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 135	135	N utilization substance protein B homolog HAMAP-Rule MF_00073		PRO_1000023757

Sequences

	Sequence		Length	Mass (Da)
	A1SJD8 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: F0C0B515160F0B48	FASTA	135	14,579
	10 20 30 40 50 60 MSARSKARKR ALDVLFASDV RGEDAVAALD RAIAEGEGPT NDYTATLVRG VVEHQARIDE 70 80 90 100 110 120 LLSSYSHGWA LDRMPAVDRN VLRLGVWELL YADDVPDAVA VSEAMALVTD LSTDESPQFV 130 NGILGSIVRN KPSLA

References

[1]

"Complete sequence of chromosome 1 of Nocardioides sp. JS614." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F. , Land M., Hauser L., Kyrpides N., Kim E., Mattes T., Gossett J., Richardson P. Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BAA-499 / JS614.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000509 Genomic DNA. Translation: ABL81923.1.
RefSeq	YP_923610.1. NC_008699.1.
3D structure databases
ProteinModelPortal	A1SJD8.
ModBase	Search...
Protein-protein interaction databases
STRING	196162.Noca_2418.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABL81923; ABL81923; Noca_2418.
GeneID	4598254.
KEGG	nca:Noca_2418.
PATRIC	22746865. VBINocSp122728_2672.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0781.
HOGENOM	HOG000281867.
KO	K03625.
OMA	WELLYND.
Enzyme and pathway databases
BioCyc	NSP196162:GH4V-2473-MONOMER.
Family and domain databases
Gene3D	1.10.940.10. 1 hit.
HAMAP	MF_00073. NusB.
InterPro	IPR011605. NusB_fam. IPR006027. NusB_RsmB_TIM44. [Graphical view]
PANTHER	PTHR11078. PTHR11078. 1 hit.
Pfam	PF01029. NusB. 1 hit. [Graphical view]
SUPFAM	SSF48013. NusB_RsmB_TIM44. 1 hit.
TIGRFAMs	TIGR01951. nusB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

NUSB_NOCSJ

Accession

Primary (citable) accession number: A1SJD8

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	February 6, 2007
Last modified:	May 1, 2013
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program