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Protein
Submitted name:

Glycosyl transferase, group 1

Gene

Noca_2065

Organism
Nocardioides sp. (strain ATCC BAA-499 / JS614)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

TransferaseImported

Protein family/group databases

CAZyiGT4. Glycosyltransferase Family 4.

Names & Taxonomyi

Protein namesi
Submitted name:
Glycosyl transferase, group 1Imported
Gene namesi
Ordered Locus Names:Noca_2065Imported
OrganismiNocardioides sp. (strain ATCC BAA-499 / JS614)Imported
Taxonomic identifieri196162 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaPropionibacterialesNocardioidaceaeNocardioides
Proteomesi
  • UP000000640 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei33 – 50HelicalSequence analysisAdd BLAST18
Transmembranei70 – 91HelicalSequence analysisAdd BLAST22
Transmembranei103 – 125HelicalSequence analysisAdd BLAST23
Transmembranei145 – 169HelicalSequence analysisAdd BLAST25
Transmembranei181 – 202HelicalSequence analysisAdd BLAST22
Transmembranei259 – 277HelicalSequence analysisAdd BLAST19
Transmembranei298 – 320HelicalSequence analysisAdd BLAST23
Transmembranei332 – 355HelicalSequence analysisAdd BLAST24

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi196162.Noca_2065.

Structurei

3D structure databases

ProteinModelPortaliA1SID9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini390 – 529Glyco_trans_4-like_NInterPro annotationAdd BLAST140
Domaini548 – 706Glycos_transf_1InterPro annotationAdd BLAST159

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4107XR6. Bacteria.
COG0438. LUCA.
HOGENOMiHOG000223780.
OrthoDBiPOG091H0AO3.

Family and domain databases

InterProiIPR001296. Glyco_trans_1.
IPR028098. Glyco_trans_4-like_N.
IPR022791. L-PG_synthase/AglD.
[Graphical view]
PfamiPF13439. Glyco_transf_4. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
PF03706. LPG_synthase_TM. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A1SID9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKASSGAAYG PGMHAVAGQP IEARSLARTW RRLRFVGSWA LALGLVAVGI
60 70 80 90 100
PQAVDVSWHG VLPVLRSLHW PAVLGLVVLW FLGLVVHSSV LTAAAPSLTH
110 120 130 140 150
RRALALNLTG SAVANVVPLG GAAGVELNRR MMRAWGIDGR RFAGYTFLTN
160 170 180 190 200
LVDIGAKLVL PVIAVVALAH AGESVTASLR YTAVLAGLAF VGLAACAAAV
210 220 230 240 250
LASPRCTVGV GRAVEWVARP VLRVLRRTTD LDVAGPLLDV RRECAQVVSR
260 270 280 290 300
GWLRMSLGMG GYVALQGLLL GLCLHVTHSG VTWTEVLAGF ALERTLTVLP
310 320 330 340 350
VTPGGVGIAD VGLVGILMAL GGDPAGAAAG AVLYRGFVFA LEIPVGGGTL
360 370 380 390 400
GVWLLGRRRA ARRVQHPARI VGADPRRVAH VTDVFLPRLG GIETHVDDLV
410 420 430 440 450
RHQRARGVDA VVLTPTASAG RDPEWVHRLP AAAARRFATE YDAVHVHVSM
460 470 480 490 500
LSPYGLGVAR AALAAGVPTL VTVHSMWAGV GGLLRLAALA RLRRWPVVWS
510 520 530 540 550
AVSGAAAETF RGSLHGGDVA VLPNAIDVEQ WRRSPAPPRP ARPQGPGEEA
560 570 580 590 600
PITLVSVMRL MPRKRPLPLI RTFEQVRALV PGRDVRLLVV GDGPLRGRVE
610 620 630 640 650
RYVRRRGLVG CVRVTGRIPR SEVLGHLLSA SVYVAPAPKE SFGLAALEAR
660 670 680 690 700
CAGLPVVANR RSGVGEFIRD RVDGILVADD AEMVVALADL VLDPGLRERI
710 720 730 740 750
AEHNRRVAPA FDWSDALDRT EALYRLAGER LAAPARTAEP LVPALLEAQA
Length:750
Mass (Da):79,413
Last modified:February 6, 2007 - v1
Checksum:iB24E344D721313DD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000509 Genomic DNA. Translation: ABL81574.1.

Genome annotation databases

EnsemblBacteriaiABL81574; ABL81574; Noca_2065.
KEGGinca:Noca_2065.
PATRICi22746177. VBINocSp122728_2332.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000509 Genomic DNA. Translation: ABL81574.1.

3D structure databases

ProteinModelPortaliA1SID9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi196162.Noca_2065.

Protein family/group databases

CAZyiGT4. Glycosyltransferase Family 4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABL81574; ABL81574; Noca_2065.
KEGGinca:Noca_2065.
PATRICi22746177. VBINocSp122728_2332.

Phylogenomic databases

eggNOGiENOG4107XR6. Bacteria.
COG0438. LUCA.
HOGENOMiHOG000223780.
OrthoDBiPOG091H0AO3.

Family and domain databases

InterProiIPR001296. Glyco_trans_1.
IPR028098. Glyco_trans_4-like_N.
IPR022791. L-PG_synthase/AglD.
[Graphical view]
PfamiPF13439. Glyco_transf_4. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
PF03706. LPG_synthase_TM. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiA1SID9_NOCSJ
AccessioniPrimary (citable) accession number: A1SID9
Entry historyi
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: November 2, 2016
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.