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A1SHQ1 (A1SHQ1_NOCSJ) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Noca_1824 EMBL ABL81336.1
OrganismNocardioides sp. (strain BAA-499 / JS614) [Complete proteome] [HAMAP] EMBL ABL81336.1
Taxonomic identifier196162 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesPropionibacterineaeNocardioidaceaeNocardioides

Protein attributes

Sequence length391 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABL81336.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functioncyclic-di-GMP binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 4848 Potential EMBL ABL81336.1
Chain49 – 391343 Potential EMBL ABL81336.1
PRO_5000206035

Sequences

Sequence LengthMass (Da)Tools
A1SHQ1 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: AF31F93CA7DB42B8

FASTA39142,391
        10         20         30         40         50         60 
MGRLFGSARR RPRAGTRSRR YRSMVRYTVA AALVAALVAL TCYTAWTQLA GRHLMLIDRA 

        70         80         90        100        110        120 
ASATWPNLGI RDLRADHTAD SAIRQPNPPR GPAEARVTDT PAPVRATGGQ PRSLDGTTVA 

       130        140        150        160        170        180 
LIVNLAAIGL GALIQQAMLR RLRRGNHARR EGQRELISPA EVEDQGADSQ EVASDHDAEP 

       190        200        210        220        230        240 
DHEMGQDLDH DPDERGDDES TAPIDHDDAV PTARTRRTPV APTTVPLADP ADRIDNAPVT 

       250        260        270        280        290        300 
AGAVRVAARR DTAAAADTRP GTSGSSTYEP GDLDTLSAAS VVYDRRERLR VPYQGRARLQ 

       310        320        330        340        350        360 
WAGHDLACET INLDINGVRC TLPAQGEAAP APGTPARITL MLDGVLLPTA ARVTSSASEG 

       370        380        390 
NQWRIGLRFE PLEDHYRETL LTFLHEQHRM N 

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References

[1]"Complete sequence of chromosome 1 of Nocardioides sp. JS614."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F. expand/collapse author list , Land M., Hauser L., Kyrpides N., Kim E., Mattes T., Gossett J., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BAA-499 / JS614.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000509 Genomic DNA. Translation: ABL81336.1.
RefSeqYP_923023.1. NC_008699.1.

3D structure databases

ProteinModelPortalA1SHQ1.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABL81336; ABL81336; Noca_1824.
GeneID4597662.
KEGGnca:Noca_1824.
PATRIC22745681. VBINocSp122728_2090.

Organism-specific databases

CMRSearch...

Enzyme and pathway databases

BioCycNSP196162:GH4V-1852-MONOMER.

Family and domain databases

InterProIPR009875. PilZ_domain.
[Graphical view]
PfamPF07238. PilZ. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA1SHQ1_NOCSJ
AccessionPrimary (citable) accession number: A1SHQ1
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: May 29, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)