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Protein
Submitted name:

Superoxide dismutase

Gene

Noca_1725

Organism
Nocardioides sp. (strain BAA-499 / JS614)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Enzyme and pathway databases

BioCyciNSP196162:GH4V-1751-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Superoxide dismutaseImported (EC:1.15.1.1Imported)
Gene namesi
Ordered Locus Names:Noca_1725Imported
OrganismiNocardioides sp. (strain BAA-499 / JS614)Imported
Taxonomic identifieri196162 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaPropionibacterialesNocardioidaceaeNocardioides
ProteomesiUP000000640 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi196162.Noca_1725.

Structurei

3D structure databases

ProteinModelPortaliA1SHF3.
SMRiA1SHF3. Positions 15-133.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG39351.
HOGENOMiHOG000020289.
KOiK00518.
OMAiWTDYFKP.
OrthoDBiEOG683S9W.

Family and domain databases

Gene3Di1.20.120.400. 1 hit.
InterProiIPR014123. Superoxide_dismutase_Ni-type.
[Graphical view]
PfamiPF09055. Sod_Ni. 1 hit.
[Graphical view]
SUPFAMiSSF109770. SSF109770. 1 hit.
TIGRFAMsiTIGR02753. sodN. 1 hit.

Sequencei

Sequence statusi: Complete.

A1SHF3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFVRLFAPTL EVSAHCDLPC GVYDPAQARI EAESIKAIIA KVADNDDPDF
60 70 80 90 100
RTRAILIKEQ RSELVKHHLW VLWTDYFKPP HFEKYPQLHT LVNEATKLAG
110 120 130
AAGTKGELDA GKADELLAKI DQIAEIFWET KKA
Length:133
Mass (Da):15,000
Last modified:February 6, 2007 - v1
Checksum:i21B9095D0FAB858E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000509 Genomic DNA. Translation: ABL81238.1.
RefSeqiWP_011755185.1. NC_008699.1.
YP_922925.1. NC_008699.1.

Genome annotation databases

EnsemblBacteriaiABL81238; ABL81238; Noca_1725.
KEGGinca:Noca_1725.
PATRICi22745465. VBINocSp122728_1984.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000509 Genomic DNA. Translation: ABL81238.1.
RefSeqiWP_011755185.1. NC_008699.1.
YP_922925.1. NC_008699.1.

3D structure databases

ProteinModelPortaliA1SHF3.
SMRiA1SHF3. Positions 15-133.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi196162.Noca_1725.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABL81238; ABL81238; Noca_1725.
KEGGinca:Noca_1725.
PATRICi22745465. VBINocSp122728_1984.

Phylogenomic databases

eggNOGiNOG39351.
HOGENOMiHOG000020289.
KOiK00518.
OMAiWTDYFKP.
OrthoDBiEOG683S9W.

Enzyme and pathway databases

BioCyciNSP196162:GH4V-1751-MONOMER.

Family and domain databases

Gene3Di1.20.120.400. 1 hit.
InterProiIPR014123. Superoxide_dismutase_Ni-type.
[Graphical view]
PfamiPF09055. Sod_Ni. 1 hit.
[Graphical view]
SUPFAMiSSF109770. SSF109770. 1 hit.
TIGRFAMsiTIGR02753. sodN. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome 1 of Nocardioides sp. JS614."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F.
    , Land M., Hauser L., Kyrpides N., Kim E., Mattes T., Gossett J., Richardson P.
    Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BAA-499 / JS614Imported.

Entry informationi

Entry nameiA1SHF3_NOCSJ
AccessioniPrimary (citable) accession number: A1SHF3
Entry historyi
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: June 24, 2015
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.