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Protein
Submitted name:

Glycosyl transferase, group 1

Gene

Noca_1563

Organism
Nocardioides sp. (strain ATCC BAA-499 / JS614)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

TransferaseImported

Protein family/group databases

CAZyiGT4. Glycosyltransferase Family 4.

Names & Taxonomyi

Protein namesi
Submitted name:
Glycosyl transferase, group 1Imported
Gene namesi
Ordered Locus Names:Noca_1563Imported
OrganismiNocardioides sp. (strain ATCC BAA-499 / JS614)Imported
Taxonomic identifieri196162 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaPropionibacterialesNocardioidaceaeNocardioides
Proteomesi
  • UP000000640 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei31 – 48HelicalSequence analysisAdd BLAST18
Transmembranei68 – 89HelicalSequence analysisAdd BLAST22
Transmembranei101 – 123HelicalSequence analysisAdd BLAST23
Transmembranei152 – 170HelicalSequence analysisAdd BLAST19
Transmembranei182 – 200HelicalSequence analysisAdd BLAST19
Transmembranei293 – 318HelicalSequence analysisAdd BLAST26
Transmembranei330 – 354HelicalSequence analysisAdd BLAST25

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi196162.Noca_1563.

Structurei

3D structure databases

ProteinModelPortaliA1SGZ2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini387 – 526Glyco_trans_4-like_NInterPro annotationAdd BLAST140
Domaini537 – 700Glycos_transf_1InterPro annotationAdd BLAST164

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4107XR6. Bacteria.
COG0438. LUCA.
HOGENOMiHOG000223780.
OrthoDBiPOG091H0AO3.

Family and domain databases

InterProiIPR001296. Glyco_trans_1.
IPR028098. Glyco_trans_4-like_N.
IPR022791. L-PG_synthase/AglD.
[Graphical view]
PfamiPF13439. Glyco_transf_4. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
PF03706. LPG_synthase_TM. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A1SGZ2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTGTYAAEHS PDALAGAALS PARRSQMWGR LRFLGSWILA LILVAVALPR
60 70 80 90 100
TVDVSWHGLL PALRAVHWPA LLALVALWLL GLFVHSFVLT AAAPALTHRR
110 120 130 140 150
ALTLNVTGSA VANVVPLGGA AGVELNRRMM KAWGIDTRAF AGYTFLTNLW
160 170 180 190 200
DVASKLLLPM IGVIALVHAG ETITPQLKTA SVLAGIAFLG LAAFATVLLL
210 220 230 240 250
SPRGTAQLGH GIEQTLRFGL RLIGRDRALD LAGRLNDVRS ECAGLVASGW
260 270 280 290 300
VRMTAGITGY VALQWLLLGF CLQLTGAGTT WPEVLAGFAV ERLFTIVPLT
310 320 330 340 350
PGGVGVADLG LVGVLLTLGG DPAGVTAAAV LYRLFVFAVE IPVGGGVLGI
360 370 380 390 400
WFLAQRRTPA RPQDAVRSLG PTRRIAHVTD VFLPRLGGIE THVDDLVRHQ
410 420 430 440 450
RATGLDAHVL TPTPGNGPDP AWVRRMPAVV ARGTVTEYDT IHVHISMWSP
460 470 480 490 500
YGIAVARAAM AAGMPTLITV HSMWAGAGGL LRLIALAGLR RWPVAWSAVS
510 520 530 540 550
GAAAEAFRRS LNGAEVAVLP NAIDIDSWRP RPAPIARREP QAAEGPLTVV
560 570 580 590 600
SVMRLMPRKR PLQLLDMFER IRALTPNDDV RLVIVGDGPL HRRLQRAVRR
610 620 630 640 650
RGLDERVRIT GRIPRHQVLE ELQAASLYVA PAPKESFGIA ALEARCAGLP
660 670 680 690 700
VVAHRRSGVG EFVRDRVDGI LVANDTEMVV AIADLVRDPS LRNRFTAHNR
710 720 730 740
RVAPKLDWSD ILRQTDALYL KAASRAVLLT QEIAAPVPVM AEA
Length:743
Mass (Da):79,722
Last modified:February 6, 2007 - v1
Checksum:i3BDCAB6462150272
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000509 Genomic DNA. Translation: ABL81077.1.

Genome annotation databases

EnsemblBacteriaiABL81077; ABL81077; Noca_1563.
KEGGinca:Noca_1563.
PATRICi22745135. VBINocSp122728_1820.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000509 Genomic DNA. Translation: ABL81077.1.

3D structure databases

ProteinModelPortaliA1SGZ2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi196162.Noca_1563.

Protein family/group databases

CAZyiGT4. Glycosyltransferase Family 4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABL81077; ABL81077; Noca_1563.
KEGGinca:Noca_1563.
PATRICi22745135. VBINocSp122728_1820.

Phylogenomic databases

eggNOGiENOG4107XR6. Bacteria.
COG0438. LUCA.
HOGENOMiHOG000223780.
OrthoDBiPOG091H0AO3.

Family and domain databases

InterProiIPR001296. Glyco_trans_1.
IPR028098. Glyco_trans_4-like_N.
IPR022791. L-PG_synthase/AglD.
[Graphical view]
PfamiPF13439. Glyco_transf_4. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
PF03706. LPG_synthase_TM. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiA1SGZ2_NOCSJ
AccessioniPrimary (citable) accession number: A1SGZ2
Entry historyi
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: November 2, 2016
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.