A1SG16 (A1SG16_NOCSJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ABL80751.1

Gene names

Ordered Locus Names:

Noca_1237 EMBL ABL80751.1

Organism

Nocardioides sp. (strain BAA-499 / JS614) [Complete proteome] [HAMAP] EMBL ABL80751.1

Taxonomic identifier

196162 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Propionibacterineae › Nocardioidaceae › Nocardioides

Protein attributes

Sequence length	304 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ABL80751.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	DNA primase activity Inferred from electronic annotation. Source: InterPro ligase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1SG16 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: 6F91F51D3CAE3481	FASTA	304	33,298
	10 20 30 40 50 60 MAQPEKEEVR VQVDGRTLTI SNLYKVLYPR TGTTKGEVLN YYAQVAPTLL PHLAGRCVTR 70 80 90 100 110 120 IRWPHGVHEG SFFEKNAPAG TPSWVRTAEV PTTGSRAQSS SDTLVFPIIE DLATLTWLVN 130 140 150 160 170 180 LAALELHVHQ WTVDRSGRPR GADRVVVDLD PGEPAGLHEC CRVALMVRDR LAERGLAAKP 190 200 210 220 230 240 VTSGSKGLHL YADLPERVPS EDSSALAKAV AEELQGEHPA LVTATMTKAR RAGKVFLDWS 250 260 270 280 290 300 QNAGSKTTVS PYSLRGRELP TVATPLAWAE VEAGAQDPMA LRQFRFDEVL ERVQEHGDLF AGPR

References

[1]

"Complete sequence of chromosome 1 of Nocardioides sp. JS614." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F. , Land M., Hauser L., Kyrpides N., Kim E., Mattes T., Gossett J., Richardson P. Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BAA-499 / JS614.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000509 Genomic DNA. Translation: ABL80751.1.
RefSeq	YP_922438.1. NC_008699.1.
3D structure databases
ProteinModelPortal	A1SG16.
ModBase	Search...
Protein-protein interaction databases
STRING	196162.Noca_1237.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABL80751; ABL80751; Noca_1237.
GeneID	4599233.
KEGG	nca:Noca_1237.
PATRIC	22744443. VBINocSp122728_1479.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3285.
HOGENOM	HOG000244654.
KO	K01971.
OMA	VWLANLA.
Enzyme and pathway databases
BioCyc	NSP196162:GH4V-1292-MONOMER.
Family and domain databases
InterPro	IPR002755. DNA_primase_S. IPR014145. LigD_pol. [Graphical view]
Pfam	PF01896. DNA_primase_S. 1 hit. [Graphical view]
TIGRFAMs	TIGR02778. ligD_pol. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A1SG16_NOCSJ

Accession

Primary (citable) accession number: A1SG16

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	May 1, 2013
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)