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A1SF45

- A1SF45_NOCSJ

UniProt

A1SF45 - A1SF45_NOCSJ

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Noca_0907

Organism
Nocardioides sp. (strain BAA-499 / JS614)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 46 (01 Oct 2014)
      Sequence version 1 (06 Feb 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciNSP196162:GH4V-924-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Noca_0907Imported
    OrganismiNocardioides sp. (strain BAA-499 / JS614)Imported
    Taxonomic identifieri196162 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPropionibacterineaeNocardioidaceaeNocardioides
    ProteomesiUP000000640: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi196162.Noca_0907.

    Structurei

    3D structure databases

    ProteinModelPortaliA1SF45.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000222508.
    KOiK01971.
    OMAiHERTADC.
    OrthoDBiEOG63NMFT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A1SF45-1 [UniParc]FASTAAdd to Basket

    « Hide

    MQLPVMPPVQ PMLAKSVKGI PDPEKHGGLS FEPKWDGFRC LVFKDGDEVE    50
    LASRNTKPLT RYFPEVVAAM REQLPHRCVL DGELFVALPN DAGVERLEFE 100
    VLQERIHPAR SRIELLAEKT PASYVAFDLL ALDDESYAER PFAERRAALE 150
    RALGDLDGPC FLTRTTTDPA QAEEWFHQFE GAGLDGVVAK PLGAAYQQNA 200
    RTMLKIKHER TADVVVAGYR EHKTSTPDRP LLGSLLLGLY ADGQLQHVGV 250
    SASFTAARRA ELIEELQPLV VPIADHPWGE WADWAIANPD RVPGTQSRWS 300
    QGKDLSFTPL RPERVLEVAY DHMEGRRFRH TAQFRRWRPD RDPESCGYDQ 350
    LEEPVGYDLA RILNVD 366
    Length:366
    Mass (Da):41,282
    Last modified:February 6, 2007 - v1
    Checksum:iFB6C92F1C6479CDE
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000509 Genomic DNA. Translation: ABL80430.1.
    RefSeqiWP_011754379.1. NC_008699.1.
    YP_922117.1. NC_008699.1.

    Genome annotation databases

    EnsemblBacteriaiABL80430; ABL80430; Noca_0907.
    GeneIDi4599589.
    KEGGinca:Noca_0907.
    PATRICi22743811. VBINocSp122728_1165.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000509 Genomic DNA. Translation: ABL80430.1 .
    RefSeqi WP_011754379.1. NC_008699.1.
    YP_922117.1. NC_008699.1.

    3D structure databases

    ProteinModelPortali A1SF45.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 196162.Noca_0907.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABL80430 ; ABL80430 ; Noca_0907 .
    GeneIDi 4599589.
    KEGGi nca:Noca_0907.
    PATRICi 22743811. VBINocSp122728_1165.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000222508.
    KOi K01971.
    OMAi HERTADC.
    OrthoDBi EOG63NMFT.

    Enzyme and pathway databases

    BioCyci NSP196162:GH4V-924-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome 1 of Nocardioides sp. JS614."
      Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F.
      , Land M., Hauser L., Kyrpides N., Kim E., Mattes T., Gossett J., Richardson P.
      Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BAA-499 / JS614Imported.

    Entry informationi

    Entry nameiA1SF45_NOCSJ
    AccessioniPrimary (citable) accession number: A1SF45
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 6, 2007
    Last sequence update: February 6, 2007
    Last modified: October 1, 2014
    This is version 46 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3