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A1SF45 (A1SF45_NOCSJ) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Noca_0907 EMBL ABL80430.1
OrganismNocardioides sp. (strain BAA-499 / JS614) [Complete proteome] [HAMAP] EMBL ABL80430.1
Taxonomic identifier196162 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesPropionibacterineaeNocardioidaceaeNocardioides

Protein attributes

Sequence length366 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
A1SF45 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: FB6C92F1C6479CDE

FASTA36641,282
        10         20         30         40         50         60 
MQLPVMPPVQ PMLAKSVKGI PDPEKHGGLS FEPKWDGFRC LVFKDGDEVE LASRNTKPLT 

        70         80         90        100        110        120 
RYFPEVVAAM REQLPHRCVL DGELFVALPN DAGVERLEFE VLQERIHPAR SRIELLAEKT 

       130        140        150        160        170        180 
PASYVAFDLL ALDDESYAER PFAERRAALE RALGDLDGPC FLTRTTTDPA QAEEWFHQFE 

       190        200        210        220        230        240 
GAGLDGVVAK PLGAAYQQNA RTMLKIKHER TADVVVAGYR EHKTSTPDRP LLGSLLLGLY 

       250        260        270        280        290        300 
ADGQLQHVGV SASFTAARRA ELIEELQPLV VPIADHPWGE WADWAIANPD RVPGTQSRWS 

       310        320        330        340        350        360 
QGKDLSFTPL RPERVLEVAY DHMEGRRFRH TAQFRRWRPD RDPESCGYDQ LEEPVGYDLA 


RILNVD 

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References

[1]"Complete sequence of chromosome 1 of Nocardioides sp. JS614."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F. expand/collapse author list , Land M., Hauser L., Kyrpides N., Kim E., Mattes T., Gossett J., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BAA-499 / JS614.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000509 Genomic DNA. Translation: ABL80430.1.
RefSeqYP_922117.1. NC_008699.1.

3D structure databases

ProteinModelPortalA1SF45.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING196162.Noca_0907.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABL80430; ABL80430; Noca_0907.
GeneID4599589.
KEGGnca:Noca_0907.
PATRIC22743811. VBINocSp122728_1165.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000222508.
KOK01971.
OMAHERTADC.
OrthoDBEOG63NMFT.

Enzyme and pathway databases

BioCycNSP196162:GH4V-924-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA1SF45_NOCSJ
AccessionPrimary (citable) accession number: A1SF45
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: May 14, 2014
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)