A1SED6 (A1SED6_NOCSJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
4-aminobutyrate aminotransferase apoenzyme EMBL ABL80171.1
EC=2.6.1.19 EMBL ABL80171.1

Gene names

Ordered Locus Names:

Noca_0645

Organism

Nocardioides sp. (strain BAA-499 / JS614) [Complete proteome] [HAMAP]

Taxonomic identifier

196162 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Propionibacterineae › Nocardioidaceae › Nocardioides

Protein attributes

Sequence length	452 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003560
Molecular function	Aminotransferase EMBL ABL80171.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	gamma-aminobutyric acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	4-aminobutyrate transaminase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1SED6 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: 60D69E6B7056F752	FASTA	452	46,845
	10 20 30 40 50 60 MTAVSDEKPS KLSAVHQQRL LRTELPGPAS RRLMARKSAA VAQGVGTTMP VFAANADGGV 70 80 90 100 110 120 VVDVDGNQFI DLGSGIAVTS VGASASRVVA AVQEQVAAFT HTCFMVTPYA GYVSVAEALN 130 140 150 160 170 180 RLTPGGHEKR TALFNSGAEA VENAVKIARS HTGRQAVVVF DHAYHGRTNL TMAMTAKNMP 190 200 210 220 230 240 YKHGFGPFAG EVYRAPLSYP YRDGGVGGAT AAARAIDVIE KQVGTANLAA VVIEPIQGEG 250 260 270 280 290 300 GFIEPAAGFL PALVAWCRAN AAVFVADEVQ TGFARTGDWF ACDREGVVPD LIVTAKGIAG 310 320 330 340 350 360 GLPLSAVTGR AEMMDAAHVG GLGGTYGGNP IACAAALASI ETIEAEGLVA RAREIEGLLL 370 380 390 400 410 420 GRLRAIEARD SRIGNVRGRG AMIAVELVRA GTDEPDPELA KAVAAAAHRQ GVIVLTCGTY 430 440 450 GNVLRFLPPL SISDDLLNDA FDVLAATFEV TK

References

[1]

"Complete sequence of chromosome 1 of Nocardioides sp. JS614." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F. , Land M., Hauser L., Kyrpides N., Kim E., Mattes T., Gossett J., Richardson P. Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BAA-499 / JS614.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000509 Genomic DNA. Translation: ABL80171.1.
RefSeq	YP_921858.1. NC_008699.1.
3D structure databases
ProteinModelPortal	A1SED6.
ModBase	Search...
Protein-protein interaction databases
STRING	A1SED6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4596062.
GenomeReviews	Gene locus Noca_0645 in contig CP000509_GR.
KEGG	nca:Noca_0645.
PATRIC	22743267. VBINocSp122728_0898.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0160.
HOGENOM	HBG725944.
OMA	DNAYHGR.
PhylomeDB	A1SED6.
Enzyme and pathway databases
BioCyc	NSP35761:NOCA_0645-MONOMER.
Family and domain databases
InterPro	IPR004632. 4NH2But_aminotransferase_bac. IPR005814. Aminotrans_3. IPR015424. PyrdxlP-dep_Trfase_major_dom. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Gene3D	G3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit. G3DSA:3.90.1150.10. PyrdxlP-dep_Trfase_major_sub2. 1 hit.
KO	K07250.
PANTHER	PTHR11986. Aminotrans_3. 1 hit.
Pfam	PF00202. Aminotran_3. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR00700. GABAtrnsam. 1 hit.
PROSITE	PS00600. AA_TRANSFER_CLASS_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A1SED6_NOCSJ

Accession

Primary (citable) accession number: A1SED6

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	December 14, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)