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A1SE71 (Y564_NOCSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified December 14, 2011. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
UPF0234 protein Noca_0564
Gene names
Ordered Locus Names:Noca_0564
OrganismNocardioides sp. (strain BAA-499 / JS614) [Complete proteome] [HAMAP]
Taxonomic identifier196162 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Propionibacterineae › Nocardioidaceae › Nocardioides

Protein attributes

Sequence length163 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the UPF0234 family.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 163163UPF0234 protein Noca_0564 HAMAP MF_00632
PRO_1000051746

Sequences

Sequence LengthMass (Da)Tools
A1SE71 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: D3D9816AE7277454

FASTA16317,986
        10         20         30         40         50         60 
MADSSFDIVS KIDRQEVDNA LGQTAREIAT RFDFKGTGAS IEWQGEHAIE ISASADDRAS 

        70         80         90        100        110        120 
AVLDVFKTKL VKRDVSLKVL DASEPRQSGQ QSKIAIALKE GISSEDAKKI SKLIRDEGPK 

       130        140        150        160 
GVKAQIQGDE LRVSSKKRDD LQAVIALVKQ QDYDFAVQFT NYR

« Hide

References

[1]"Complete sequence of chromosome 1 of Nocardioides sp. JS614."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F. expand/collapse author list , Land M., Hauser L., Kyrpides N., Kim E., Mattes T., Gossett J., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BAA-499 / JS614.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000509 Genomic DNA. Translation: ABL80106.1.
RefSeqYP_921793.1. NC_008699.1.

3D structure databases

ProteinModelPortalA1SE71.
ModBaseSearch...

Protein-protein interaction databases

STRINGA1SE71.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4596231.
GenomeReviewsGene locus Noca_0564 in contig CP000509_GR.
KEGGnca:Noca_0564.
PATRIC22743153. VBINocSp122728_0842.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1666.
HOGENOMHBG290634.
OMALQFTNYR.
PhylomeDBA1SE71.
ProtClustDBPRK05412.

Enzyme and pathway databases

BioCycNSP35761:NOCA_0564-MONOMER.

Family and domain databases

HAMAPMF_00632. UPF0234.
[Tree]
InterProIPR007551. DUF520.
[Graphical view]
PfamPF04461. DUF520. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameY564_NOCSJ
AccessionPrimary (citable) accession number: A1SE71
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: February 6, 2007
Last modified: December 14, 2011
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Uncharacterized protein families (UPF)

List of uncharacterized protein family (UPF) entries

SIMILARITY comments

Index of protein domains and families

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