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A1SCV0 (A1SCV0_NOCSJ) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Noca_0089
OrganismNocardioides sp. (strain BAA-499 / JS614) [Complete proteome] [HAMAP]
Taxonomic identifier196162 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesPropionibacterineaeNocardioidaceaeNocardioides

Protein attributes

Sequence length542 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the aldehyde dehydrogenase family. RuleBase RU003345

Sequences

Sequence LengthMass (Da)Tools
A1SCV0 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: D2B028BD40D9A440

FASTA54258,879
        10         20         30         40         50         60 
MDAVTTPPAP TNEPNLTYAP GAPERATLVA EIEKLQKTQK TLHAYIGGRW RAGGGAEIPV 

        70         80         90        100        110        120 
VQPHDHQHVL GTMKNSTQAD ARAAITAASD AAPQWRDMTF DDRAAVLLKA ADLLAGPWRQ 

       130        140        150        160        170        180 
RLNAATMLGQ SKTAFQAEID SACELVDFWR FNVHYAKQIL TDQPIANSPG VWNRTDHRPL 

       190        200        210        220        230        240 
EGFVYAITPF NFTAIAGNLP TAPVLMGNTV LWKPSSTQQL AASLTMELLE EAGMPPGVIN 

       250        260        270        280        290        300 
MLPGDGLAVS EVALAHPDLA GIHFTGSTPL FQRLWKTVGE NIARYRSYPR LVGETGGKDF 

       310        320        330        340        350        360 
IVAHASADPD VLRTAMIRGA FEFQGQKCSA ASRAYVARSV WNKMKDSFLS EIESLTVGDP 

       370        380        390        400        410        420 
TDFSHFMGAV IDDRAFARHR AAIDRAKRSG KLDILAGGTL DDTVGWFVRP TAIESGDPTD 

       430        440        450        460        470        480 
EIFTTEYFGP ILAVHVFDDG DFEKVVHAME SSTPYALTGS IIARDRRTIA WAQETLRFAA 

       490        500        510        520        530        540 
GNFYVNDKPT GAVVGQQPFG GGRASGTNDK AGSAANLLRW TSPRSIKETF DPPTDYRYPH 


LG 

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References

[1]"Complete sequence of chromosome 1 of Nocardioides sp. JS614."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F. expand/collapse author list , Land M., Hauser L., Kyrpides N., Kim E., Mattes T., Gossett J., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BAA-499 / JS614.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000509 Genomic DNA. Translation: ABL79635.1.
RefSeqYP_921322.1. NC_008699.1.

3D structure databases

ProteinModelPortalA1SCV0.
ModBaseSearch...

Protein-protein interaction databases

STRINGA1SCV0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4600062.
GenomeReviewsGene locus Noca_0089 in contig CP000509_GR.
KEGGnca:Noca_0089.
PATRIC22742143. VBINocSp122728_0344.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1012.
HOGENOMHBG752218.
OMACELVDFW.
PhylomeDBA1SCV0.
ProtClustDBCLSK871904.

Enzyme and pathway databases

BioCycNSP35761:NOCA_0089-MONOMER.

Family and domain databases

InterProIPR016161. Ald_DH/histidinol_DH.
IPR016163. Ald_DH_C.
IPR016160. Ald_DH_CS.
IPR016162. Ald_DH_N.
IPR015590. Aldehyde_DH_dom.
IPR005931. Delta1-pyrroline-5-COlate_DH-1.
[Graphical view]
Gene3DG3DSA:3.40.309.10. Aldehyde_dehydrogenase_C. 1 hit.
G3DSA:3.40.605.10. Aldehyde_dehydrogenase_N. 1 hit.
KOK00294.
PfamPF00171. Aldedh. 1 hit.
[Graphical view]
SUPFAMSSF53720. Aldehyde_DH/Histidinol_DH. 1 hit.
TIGRFAMsTIGR01236. D1pyr5carbox1. 1 hit.
PROSITEPS00070. ALDEHYDE_DEHYDR_CYS. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA1SCV0_NOCSJ
AccessionPrimary (citable) accession number: A1SCV0
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: December 14, 2011
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)