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Protein
Submitted name:

Metal-dependent phosphohydrolase, HD sub domain

Gene

Noca_4918

Organism
Nocardioides sp. (strain BAA-499 / JS614)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciNSP196162:GH4V-4972-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Metal-dependent phosphohydrolase, HD sub domainImported
Gene namesi
Ordered Locus Names:Noca_4918Imported
Encoded oniPlasmid pNOCA01Imported
OrganismiNocardioides sp. (strain BAA-499 / JS614)Imported
Taxonomic identifieri196162 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaPropionibacterialesNocardioidaceaeNocardioides
ProteomesiUP000000640 Componenti: Plasmid pNOCA01

Structurei

3D structure databases

ProteinModelPortaliA1SCG3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 HTH luxR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

eggNOGiCOG2771.
HOGENOMiHOG000268981.
OMAiEHIYAKT.
OrthoDBiEOG6G4VQG.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProiIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
PROSITEiPS50043. HTH_LUXR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A1SCG3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDPPADLRLS DVLAALSVAT DLGMGQHPEK AVRSCLLATG LGRALGLTEE
60 70 80 90 100
ELRDVYFASL LRHLGCTATA SSEARWFGGD ELASRRAAER ADFGSRREML
110 120 130 140 150
ALLVSTGRGS GLRRPLEVGR AVAGDLLHGR EIFASVCEAG ALLAGRLGLG
160 170 180 190 200
EGVAVAIAQQ FERWDGTGGP GGLAGVEITL AARVSEVATQ ALLVHQEAGV
210 220 230 240 250
DAVMSMLRDR SGSWFDPSVV EACARHGADL LRANDTVDPW QEVLEVEPAP
260 270 280 290 300
VRRIRSGELD RVARCFADMV DLKSTYTLGH SSGTSELAEL AGRAIGLDDP
310 320 330 340 350
AVGNLRRAAL LHDLGRVGVS SGIWDKPGAL TRSELEQVRL HPYHTERILA
360 370 380 390 400
CSPVLAPLGR IAGLHHERLD GSGYHHGLAA AAIPIEARVL AAADTFQTLT
410 420 430 440 450
QDRPHRAAHP PERAAERLAE EARAGRFDTD SVRAVVEAAG EQPAPVRGNW
460 470 480 490 500
PSGLSDREVE VLRLVAKGLS NQEVAQTLVI SRRTAEHHVQ HVYAKIGTST
510
RAAAALYAME HDLLRP
Length:516
Mass (Da):55,078
Last modified:February 6, 2007 - v1
Checksum:iC8DADBF90FFC2D22
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000508 Genomic DNA. Translation: ABL79498.1.
RefSeqiWP_011751623.1. NC_008697.1.

Genome annotation databases

EnsemblBacteriaiABL79498; ABL79498; Noca_4918.
KEGGinca:Noca_4918.
PATRICi22741846. VBINocSp122728_0199.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000508 Genomic DNA. Translation: ABL79498.1.
RefSeqiWP_011751623.1. NC_008697.1.

3D structure databases

ProteinModelPortaliA1SCG3.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABL79498; ABL79498; Noca_4918.
KEGGinca:Noca_4918.
PATRICi22741846. VBINocSp122728_0199.

Phylogenomic databases

eggNOGiCOG2771.
HOGENOMiHOG000268981.
OMAiEHIYAKT.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciNSP196162:GH4V-4972-MONOMER.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProiIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
PROSITEiPS50043. HTH_LUXR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BAA-499 / JS614Imported.

Entry informationi

Entry nameiA1SCG3_NOCSJ
AccessioniPrimary (citable) accession number: A1SCG3
Entry historyi
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: July 22, 2015
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, PlasmidImported, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.