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A1SCG3 (A1SCG3_NOCSJ) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Noca_4918 EMBL ABL79498.1
Encoded onPlasmid pNOCA01 EMBL ABL79498.1
OrganismNocardioides sp. (strain BAA-499 / JS614) [Complete proteome] [HAMAP] EMBL ABL79498.1
Taxonomic identifier196162 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesPropionibacterineaeNocardioidaceaeNocardioides

Protein attributes

Sequence length516 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH luxR-type DNA-binding domain. RuleBase RU000707

Sequences

Sequence LengthMass (Da)Tools
A1SCG3 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: C8DADBF90FFC2D22

FASTA51655,078
        10         20         30         40         50         60 
MDPPADLRLS DVLAALSVAT DLGMGQHPEK AVRSCLLATG LGRALGLTEE ELRDVYFASL 

        70         80         90        100        110        120 
LRHLGCTATA SSEARWFGGD ELASRRAAER ADFGSRREML ALLVSTGRGS GLRRPLEVGR 

       130        140        150        160        170        180 
AVAGDLLHGR EIFASVCEAG ALLAGRLGLG EGVAVAIAQQ FERWDGTGGP GGLAGVEITL 

       190        200        210        220        230        240 
AARVSEVATQ ALLVHQEAGV DAVMSMLRDR SGSWFDPSVV EACARHGADL LRANDTVDPW 

       250        260        270        280        290        300 
QEVLEVEPAP VRRIRSGELD RVARCFADMV DLKSTYTLGH SSGTSELAEL AGRAIGLDDP 

       310        320        330        340        350        360 
AVGNLRRAAL LHDLGRVGVS SGIWDKPGAL TRSELEQVRL HPYHTERILA CSPVLAPLGR 

       370        380        390        400        410        420 
IAGLHHERLD GSGYHHGLAA AAIPIEARVL AAADTFQTLT QDRPHRAAHP PERAAERLAE 

       430        440        450        460        470        480 
EARAGRFDTD SVRAVVEAAG EQPAPVRGNW PSGLSDREVE VLRLVAKGLS NQEVAQTLVI 

       490        500        510 
SRRTAEHHVQ HVYAKIGTST RAAAALYAME HDLLRP 

« Hide

References

[1]"Complete sequence of plasmid pNOCA01 of Nocardioides sp. JS614."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J., Larimer F. expand/collapse author list , Land M., Hauser L., Kyrpides N., Kim E., Mattes T., Gossett J., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BAA-499 / JS614.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000508 Genomic DNA. Translation: ABL79498.1.
RefSeqYP_919361.1. NC_008697.1.

3D structure databases

ProteinModelPortalA1SCG3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING196162.Noca_4918.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABL79498; ABL79498; Noca_4918.
GeneID4595289.
KEGGnca:Noca_4918.
PATRIC22741846. VBINocSp122728_0199.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2771.
HOGENOMHOG000268981.
OMAYHTERIL.
OrthoDBEOG6G4VQG.
ProtClustDBCLSK688397.

Enzyme and pathway databases

BioCycNSP196162:GH4V-4972-MONOMER.

Family and domain databases

Gene3D1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamPF00196. GerE. 1 hit.
[Graphical view]
PRINTSPR00038. HTHLUXR.
SMARTSM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMSSF46894. SSF46894. 1 hit.
PROSITEPS50043. HTH_LUXR_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA1SCG3_NOCSJ
AccessionPrimary (citable) accession number: A1SCG3
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: February 19, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)