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A1S8V7 (A1S8V7_SHEAM) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Sama_2611 EMBL ABM00814.1
OrganismShewanella amazonensis (strain ATCC BAA-1098 / SB2B) [Complete proteome] [HAMAP] EMBL ABM00814.1
Taxonomic identifier326297 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length184 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A1S8V7 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: BEE321EFB059CE0F

FASTA18421,077
        10         20         30         40         50         60 
MEPKVLPIPQ QQSQDVNDAS LAQQAAQGDK SAFEALYQRH HKRIYALALR LGGEPSLADE 

        70         80         90        100        110        120 
ILQESFVRLW HKLPQFRGES QFGTWFYSLA LNQALSTLKQ HRSFWARMVP DWQIQDAPEH 

       130        140        150        160        170        180 
SQNDDGLLLD RLIVRLPERA RLVFVLFAVE GFSHEEVASL LGISTGTSKA HYHRARELMK 


EMLS 

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References

[1]"Complete sequence of Shewanella amazonensis SB2B."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Fredrickson J., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-1098 / SB2B.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000507 Genomic DNA. Translation: ABM00814.1.
RefSeqYP_928483.1. NC_008700.1.

3D structure databases

ProteinModelPortalA1S8V7.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING326297.Sama_2611.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABM00814; ABM00814; Sama_2611.
GeneID4604858.
KEGGsaz:Sama_2611.
PATRIC23454067. VBISheAma74963_2685.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1595.
HOGENOMHOG000094755.
KOK03088.
OMAYRHEEIA.
OrthoDBEOG6ZD6DW.

Enzyme and pathway databases

BioCycSAMA326297:GH0T-2726-MONOMER.

Family and domain databases

Gene3D1.10.10.10. 1 hit.
InterProIPR014284. RNA_pol_sigma-70_dom.
IPR007627. RNA_pol_sigma70_r2.
IPR013249. RNA_pol_sigma70_r4_t2.
IPR013325. RNA_pol_sigma_r2.
IPR013324. RNA_pol_sigma_r3_r4.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamPF04542. Sigma70_r2. 1 hit.
PF08281. Sigma70_r4_2. 1 hit.
[Graphical view]
SUPFAMSSF88659. SSF88659. 1 hit.
SSF88946. SSF88946. 1 hit.
TIGRFAMsTIGR02937. sigma70-ECF. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA1S8V7_SHEAM
AccessionPrimary (citable) accession number: A1S8V7
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: May 14, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)