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Protein

dTDP-4-dehydrorhamnose reductase

Gene

Sama_2239

Organism
Shewanella amazonensis (strain ATCC BAA-1098 / SB2B)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.UniRule annotation

Catalytic activityi

dTDP-beta-L-rhamnose + NADP+ = dTDP-4-dehydro-beta-L-rhamnose + NADPH.UniRule annotation

Cofactori

Mg2+UniRule annotationNote: Binds 1 Mg2+ ion per monomer.UniRule annotation

Pathwayi: dTDP-L-rhamnose biosynthesis

This protein is involved in the pathway dTDP-L-rhamnose biosynthesis, which is part of Carbohydrate biosynthesis.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway dTDP-L-rhamnose biosynthesis and in Carbohydrate biosynthesis.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionOxidoreductaseUniRule annotationImported
LigandNADPUniRule annotation

Enzyme and pathway databases

BioCyciSAMA326297:GH0T-2330-MONOMER.
UniPathwayiUPA00124.

Names & Taxonomyi

Protein namesi
Recommended name:
dTDP-4-dehydrorhamnose reductaseUniRule annotation (EC:1.1.1.133UniRule annotation)
Gene namesi
Ordered Locus Names:Sama_2239Imported
OrganismiShewanella amazonensis (strain ATCC BAA-1098 / SB2B)Imported
Taxonomic identifieri326297 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000009175 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi326297.Sama_2239.

Structurei

3D structure databases

ProteinModelPortaliA1S7T8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 288RmlD_sub_bindInterPro annotationAdd BLAST288

Sequence similaritiesi

Belongs to the dTDP-4-dehydrorhamnose reductase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105DBZ. Bacteria.
COG1091. LUCA.
HOGENOMiHOG000227712.
KOiK00067.
OMAiAYRINAI.
OrthoDBiPOG091H07IL.

Family and domain databases

InterProiView protein in InterPro
IPR005913. dTDP_dehydrorham_reduct.
IPR016040. NAD(P)-bd_dom.
IPR029903. RmlD-like-bd.
PANTHERiPTHR10491. PTHR10491. 1 hit.
PfamiView protein in Pfam
PF04321. RmlD_sub_bind. 1 hit.
SUPFAMiSSF51735. SSF51735. 1 hit.
TIGRFAMsiTIGR01214. rmlD. 1 hit.

Sequencei

Sequence statusi: Complete.

A1S7T8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRVLLLGSSG QVGRALLAFK PAGYKLLVPG RSEVDYLQPE SITDYVLFHK
60 70 80 90 100
PQLVINCAAY TAVDKAEAET ALCTRINSGA CEHLAKAAAA ADAVLLHLST
110 120 130 140 150
DYVFDGLLDR PYNEEDSPAP LSVYGHSKWL GEQTIVANCA KHLIVRTSWI
160 170 180 190 200
FDADSNNFVN TMLRLAASRS ELRVVADQVG GPTPASELAR AIWQLARQSV
210 220 230 240 250
ERNGPWGVYH FSGQPFVSWY EFARSILTEA YRLCVIHQLP TITSISASEF
260 270 280 290 300
GSPAQRPANS RLDGSKIKAL YGVAAADWQS ELVNILKAKA RAVTSVTNPG

C
Length:301
Mass (Da):32,736
Last modified:February 6, 2007 - v1
Checksum:i6B73CED884A7350B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000507 Genomic DNA. Translation: ABM00445.1.
RefSeqiWP_011760352.1. NC_008700.1.

Genome annotation databases

EnsemblBacteriaiABM00445; ABM00445; Sama_2239.
KEGGisaz:Sama_2239.

Entry informationi

Entry nameiA1S7T8_SHEAM
AccessioniPrimary (citable) accession number: A1S7T8
Entry historyiIntegrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: September 27, 2017
This is version 63 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported