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Protein
Submitted name:

Regulatory inactivation of DnaA Hda protein

Gene

Sama_1916

Organism
Shewanella amazonensis (strain ATCC BAA-1098 / SB2B)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei185CDPCombined sources1
Binding sitei210CDPCombined sources1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi29 – 30CDPCombined sources2
Nucleotide bindingi61 – 66CDPCombined sources6

GO - Biological processi

Keywordsi

Biological processDNA replicationUniRule annotation
LigandNucleotide-bindingCombined sources

Enzyme and pathway databases

BioCyciSAMA326297:GH0T-1987-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Regulatory inactivation of DnaA Hda proteinImported
Gene namesi
Ordered Locus Names:Sama_1916Imported
OrganismiShewanella amazonensis (strain ATCC BAA-1098 / SB2B)Imported
Taxonomic identifieri326297 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000009175 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi326297.Sama_1916.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3BOSX-ray1.75A/B1-241[»]
3SC3X-ray3.00A/B18-241[»]
ProteinModelPortaliA1S6W5.
SMRiA1S6W5.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiA1S6W5.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini45 – 220Bac_DnaAInterPro annotationAdd BLAST176

Sequence similaritiesi

Belongs to the DnaA family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4108KZ1. Bacteria.
COG0593. LUCA.
HOGENOMiHOG000256538.
KOiK10763.
OMAiDWGQIYR.
OrthoDBiPOG091H0GIW.

Family and domain databases

InterProiView protein in InterPro
IPR020591. Chromosome_initiator_DnaA-like.
IPR013317. DnaA.
IPR017788. Hda.
IPR027417. P-loop_NTPase.
PfamiView protein in Pfam
PF00308. Bac_DnaA. 1 hit.
PRINTSiPR00051. DNAA.
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR03420. DnaA_homol_Hda. 1 hit.

Sequencei

Sequence statusi: Complete.

A1S6W5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRSNRVTQHP PLQLSLPVHL PDDETFTSYY PAAGNDELIG ALKSAASGDG
60 70 80 90 100
VQAIYLWGPV KSGRTHLIHA ACARANELER RSFYIPLGIH ASISTALLEG
110 120 130 140 150
LEQFDLICID DVDAVAGHPL WEEAIFDLYN RVAEQKRGSL IVSASASPME
160 170 180 190 200
AGFVLPDLVS RMHWGLTYQL QPMMDDEKLA ALQRRAAMRG LQLPEDVGRF
210 220 230 240
LLNRMARDLR TLFDVLDRLD KASMVHQRKL TIPFVKEMLR L
Length:241
Mass (Da):27,002
Last modified:February 6, 2007 - v1
Checksum:i6E2610A6BA791C40
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000507 Genomic DNA. Translation: ABM00122.1.

Genome annotation databases

EnsemblBacteriaiABM00122; ABM00122; Sama_1916.
KEGGisaz:Sama_1916.

Similar proteinsi

Entry informationi

Entry nameiA1S6W5_SHEAM
AccessioniPrimary (citable) accession number: A1S6W5
Entry historyiIntegrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: August 30, 2017
This is version 84 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported