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A1S6L6 (A1S6L6_SHEAM) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.4.15.1 EMBL ABM00023.1
Gene names
Ordered Locus Names:Sama_1817 EMBL ABM00023.1
OrganismShewanella amazonensis (strain ATCC BAA-1098 / SB2B) [Complete proteome] [HAMAP] EMBL ABM00023.1
Taxonomic identifier326297 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella

Protein attributes

Sequence length618 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2222 Potential EMBL ABM00023.1
Chain23 – 618596 Potential EMBL ABM00023.1
PRO_5000205286

Sequences

Sequence LengthMass (Da)Tools
A1S6L6 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: 7FD365AE359278DD

FASTA61868,697
        10         20         30         40         50         60 
MLRPAKLALG VALALGLSAC QDEQHSVAVN KDVAAVTAVS SNVSTQDAID FINQAEAELA 

        70         80         90        100        110        120 
ALSLEANRAE WIYSNFITED TASLSAAVNE KVTATSVRLA TEAAKFAEVE LDAVNARKLN 

       130        140        150        160        170        180 
MLRSALVLPS PLDPAKNAEL AGIVAQLNGL YGKGKYCFAD GRCLTQPELS ALMAESRDPE 

       190        200        210        220        230        240 
LLKEIWAGWR DIAKPMRPLF EREVVLANEG AKDLGFANLS ELWRSQYDMA PDAFSTELDR 

       250        260        270        280        290        300 
LWGQVKPLYD SLHCYVRGEL NAQYGDDVVP RTGPIPAHLL GNMWAQQWGT IYPLVAPKDA 

       310        320        330        340        350        360 
DPGYDVTALL AKQGYDEHKM VQQAESFFTS LGFDKLPDTF WSRSLFVQPK DRDVVCHASA 

       370        380        390        400        410        420 
WDLDNADDIR IKMCIQKTAE DFTVIHHELG HNFYQRAYKN QPFIFKNSAN DGFHEAIGDT 

       430        440        450        460        470        480 
VALSITPKYL QQIGLLDTVP DASKDIGLLL KQALDKVAFL PFGLMIDQWR WKVFSGEITP 

       490        500        510        520        530        540 
ANYNQAWWDL RLKYQGVMAP VARSEADFDP GAKYHVPGNV PYTRYFLAHI LQFQFHRSLC 

       550        560        570        580        590        600 
DVAGDQGPVH RCSIYGNQEA GAKLNQMLEM GSSKPWPEAL AVVTGKQEMD ASAVLDYFAP 

       610 
LKTWLDEQNT HANRQCGW 

« Hide

References

[1]"Complete sequence of Shewanella amazonensis SB2B."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. expand/collapse author list , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Fredrickson J., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-1098 / SB2B.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000507 Genomic DNA. Translation: ABM00023.1.
RefSeqYP_927692.1. NC_008700.1.

3D structure databases

ProteinModelPortalA1S6L6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING326297.Sama_1817.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABM00023; ABM00023; Sama_1817.
GeneID4604067.
KEGGsaz:Sama_1817.
PATRIC23452347. VBISheAma74963_1871.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG71044.
HOGENOMHOG000292210.
KOK01283.
OMATVIHHEL.
OrthoDBEOG64FK99.
ProtClustDBCLSK903437.

Enzyme and pathway databases

BioCycSAMA326297:GH0T-1885-MONOMER.

Family and domain databases

InterProIPR001548. Peptidase_M2.
[Graphical view]
PANTHERPTHR10514. PTHR10514. 1 hit.
PfamPF01401. Peptidase_M2. 1 hit.
[Graphical view]
PRINTSPR00791. PEPDIPTASEA.
ProtoNetSearch...

Entry information

Entry nameA1S6L6_SHEAM
AccessionPrimary (citable) accession number: A1S6L6
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: November 13, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)