A1S656 (A1S656_SHEAM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glucan 1,4-alpha-glucosidase EMBL ABL99862.1
EC=3.2.1.3 EMBL ABL99862.1

Gene names

Ordered Locus Names:

Sama_1656

Organism

Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) [Complete proteome] [HAMAP] EMBL ABL99862.1

Taxonomic identifier

326297 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length	817 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABL99862.1
Molecular function	Glycosidase EMBL ABL99862.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	polysaccharide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro glucan 1,4-alpha-glucosidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 28	28	Potential EMBL ABL99862.1
	Chain	29 – 817	789	Potential EMBL ABL99862.1		PRO_5000205260

Sequences

	Sequence		Length	Mass (Da)
	A1S656 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: 9FCD36FC742C2B9B	FASTA	817	88,225
	10 20 30 40 50 60 MPVTHSSSLR ALSLAIAAAL GVSACQKAPA PQETTPDKAM VKIAPGAPGN TPLWAFAGKT 70 80 90 100 110 120 GIGTSYEPYV DGAYVSTVEN PVSRVWYSVA NGVLTETMYG LIHNAQLREL SFIIKGEDFI 130 140 150 160 170 180 DFEAKDANHH QDYLHLDDKG LPESLALLLT STDKEQKYRI EKKIVTDPHR DSLIMRVSIE 190 200 210 220 230 240 ALEDGITPFL YADPHIDNGG ADDLAYLSDT GFVVTDKADA SSALSLEISI DFVRRQVGFE 250 260 270 280 290 300 GVSSGVEAIK AGHPLPGYSQ TFADAAAPQV GNVALTGELK TLARGETLTF DVVLGFGQGA 310 320 330 340 350 360 DAATANARAS LTAGFDSLAQ DFRGNDTTPG WRQYLASLPA LSAMGNATAD NGRLLNLSAM 370 380 390 400 410 420 VLKAQEDKTH AGALIASLSN PWGDTIPAVT PSTGYKAVWP RDFYQCAMAF LALGDTQTPK 430 440 450 460 470 480 VAFEYLKQIQ AGPGLKGYEG APGWFLQKTH VDGQIEWVAV QLDQTAMPIM LGWKLWQAGE 490 500 510 520 530 540 LSDDEARHWY QEMLKSAADF LVSGGHIKLD WNERTITPPS TQQERWEEQA GFSPSTIAAV 550 560 570 580 590 600 ITGLQAAAAL AEHAGDSEGA QKYLAAATRY SEQLEARTVT NKGLLSDKPY ILRISPEGTP 610 620 630 640 650 660 DTDAKLADNN GRPGLDQRQI LDGGFLELVR YGVRTADNPL VLNTLALVDD TTLEDNLRIR 670 680 690 700 710 720 YDFTTAQGQA FPGFRRYGND GYGEDTVTGA NYAENGSNSA NQRGRVWPFF TGERGHYELA 730 740 750 760 770 780 KATVGGQPLS EADKRRLINT YVAGMESLAN GGGMLPEQVW DGVGDATRFG YRLGDGTNSA 790 800 810 TPLAWTHAEY VKLVRSVHDA KVWDNYPFAK QPAPETK

References

[1]

"Complete sequence of Shewanella amazonensis SB2B." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Fredrickson J., Richardson P. Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-1098 / SB2B.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000507 Genomic DNA. Translation: ABL99862.1.
RefSeq	YP_927532.1. NC_008700.1.
3D structure databases
ProteinModelPortal	A1S656.
ModBase	Search...
Protein-protein interaction databases
STRING	A1S656.
Protein family/group databases
CAZy	GH15. Glycoside Hydrolase Family 15.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4603907.
GenomeReviews	Gene locus Sama_1656 in contig CP000507_GR.
KEGG	saz:Sama_1656.
NMPDR	fig|326297.7.peg.1564.
PATRIC	23452005. VBISheAma74963_1706.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3387.
HOGENOM	HBG290978.
OMA	RWEENAG.
ProtClustDB	CLSK890895.
Family and domain databases
InterPro	IPR008928. 6-hairpin_glycosidase-like. IPR012341. 6hp_glycosidase. IPR015220. Glucodextran_N. IPR011013. Glyco_hydro-type_carb-bd. IPR014718. Glyco_hydro-type_carb-bd_sub. IPR011613. Glyco_hydro_15. [Graphical view]
Gene3D	G3DSA:1.50.10.10. CelA/Cel48F_cat. 1 hit. G3DSA:2.70.98.10. Glyco_hydro_42_D5. 1 hit.
KO	K01178.
Pfam	PF09137. Glucodextran_N. 1 hit. PF00723. Glyco_hydro_15. 1 hit. [Graphical view]
SUPFAM	SSF74650. Gal_mut_like. 1 hit. SSF48208. Glyco_trans_6hp. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A1S656_SHEAM

Accession

Primary (citable) accession number: A1S656

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	January 25, 2012
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)