A1S5H8 (A1S5H8_SHEAM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2-oxoglutarate dehydrogenase E1 component EMBL ABL99634.1
EC=1.2.4.2 EMBL ABL99634.1

Gene names

Ordered Locus Names:

Sama_1427

Organism

Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) [Complete proteome] [HAMAP] EMBL ABL99634.1

Taxonomic identifier

326297 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella › Shewanella amazonensis

Protein attributes

Sequence length	940 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Oxidoreductase EMBL ABL99634.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular_function	oxoglutarate dehydrogenase (succinyl-transferring) activity Inferred from electronic annotation. Source: EC thiamine pyrophosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1S5H8 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: 7B481B9B6D1318EE	FASTA	940	104,642
	10 20 30 40 50 60 MHQGSMKAWL ESSHLYGSNA TYVEEMYEAY QEDPTSVSDD WRAVFDNLPP VNGASADVPE 70 80 90 100 110 120 ASHSKIRDYF RSLAQEGQRK GAGRVTDPEV DAKQVKVLQL INAYRFRGHQ NANLDPLELW 130 140 150 160 170 180 KRDAVVELDP AFHGLTADDM QREFNTGSFA YGGETLKLGE LVKALKATYC GSIGAEYMHI 190 200 210 220 230 240 TDTDEKRWIQ QRLEPSMGRA AFDKGVKTRI LEGLNAAEGM EKYLGAKFPG AKRFSLEGGD 250 260 270 280 290 300 ALVPMMREII YRAGEAGTKE IVVGMAHRGR LNVLVNVLGK RPAELFDEFA GKHAESSGSG 310 320 330 340 350 360 DVKYHQGFSS DFETPGGNVH LALAFNPSHL EIVNPVVMGS VRARQDRRGC KDGLSVMPIT 370 380 390 400 410 420 IHGDSAIAGQ GIVQETFNMS QTRGFRVGGS IRIVVNNQVG FTTSNHHDVR STEYCTDIAK 430 440 450 460 470 480 MVQAPIFHVN ADDPEAVAFV AQVAVDYRNA FKRDVVIDLV CYRRHGHNEA DEPSATQPLM 490 500 510 520 530 540 YQKIKKHPTP RKIYADRLIA ENAVSADDVT AMINGYRDAL DQGDCVVKEW RPMSLRTVDW 550 560 570 580 590 600 SPFIGQDWDV SYEPTVALAR LQKLAEKLAY VPETHPLQSR VAKIYADRVA MAKGEKLLDW 610 620 630 640 650 660 GFAETLAYAT ILEDNNRVRI TGQDSGRGTF FHRHAVLHNQ NDATTYMPLR NLAQEQGPVD 670 680 690 700 710 720 ITDSVLSEAS VLAFEYGYAT AEPGGLTIWE AQFGDFANCA QVVIDQFLSS GEQKWGRLCG 730 740 750 760 770 780 LTMLLPHGYE GQGPEHSSAR LERFLQLCAN HNMQVCVPST PAQVYHMLRR QVVRPLRRPL 790 800 810 820 830 840 VVMSPKSLLR HPLAVSSLEE LANGTFQNVI GEIDSLDPKA VNRVVFCSGK VYFELLERRR 850 860 870 880 890 900 KENLTNVAII RVEQLYPFPA EEMAAILAEY QHVTDFVWCQ EEPQNQGAWY CSQHHFWAAI 910 920 930 940 PKGATLTYAG REAAAAPACG YPELHAHQQE SLVVDALNLK

References

[1]

"Complete sequence of Shewanella amazonensis SB2B." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Fredrickson J., Richardson P. Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-1098 / SB2B.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000507 Genomic DNA. Translation: ABL99634.1.
RefSeq	YP_927304.1. NC_008700.1.
3D structure databases
ProteinModelPortal	A1S5H8.
SMR	A1S5H8. Positions 91-940.
ModBase	Search...
Protein-protein interaction databases
STRING	326297.Sama_1427.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABL99634; ABL99634; Sama_1427.
GeneID	4603679.
KEGG	saz:Sama_1427.
PATRIC	23451503. VBISheAma74963_1469.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0567.
HOGENOM	HOG000259588.
KO	K00164.
OMA	IIKRGGA.
ProtClustDB	PRK09404.
Enzyme and pathway databases
BioCyc	SAMA326297:GH0T-1557-MONOMER.
Family and domain databases
InterPro	IPR011603. 2oxoglutarate_DH_E1. IPR001017. DH_E1. IPR005475. Transketolase-like_Pyr-bd. [Graphical view]
PANTHER	PTHR23152. PTHR23152. 1 hit.
Pfam	PF00676. E1_dh. 1 hit. PF02779. Transket_pyr. 1 hit. [Graphical view]
PIRSF	PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMART	SM00861. Transket_pyr. 1 hit. [Graphical view]
TIGRFAMs	TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A1S5H8_SHEAM

Accession

Primary (citable) accession number: A1S5H8

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	May 1, 2013
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)