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Protein
Submitted name:

Pyridoxal-dependent decarboxylase

Gene

Sama_1200

Organism
Shewanella amazonensis (strain ATCC BAA-1098 / SB2B)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLyaseUniRule annotation
LigandPyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Pyridoxal-dependent decarboxylaseImported
Gene namesi
Ordered Locus Names:Sama_1200Imported
OrganismiShewanella amazonensis (strain ATCC BAA-1098 / SB2B)Imported
Taxonomic identifieri326297 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000009175 Componenti: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei352N6-(pyridoxal phosphate)lysineUniRule annotation1

Interactioni

Protein-protein interaction databases

STRINGi326297.Sama_1200

Structurei

3D structure databases

ProteinModelPortaliA1S4V1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili477 – 497Sequence analysisAdd BLAST21

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG4105DY8 Bacteria
COG0076 LUCA
HOGENOMiHOG000282553
KOiK01580
OMAiFHKHFFQ
OrthoDBiPOG091H05DC

Family and domain databases

Gene3Di3.40.640.10, 1 hit
InterProiView protein in InterPro
IPR022517 Asp_decarboxylase_pyridox
IPR002129 PyrdxlP-dep_de-COase
IPR015424 PyrdxlP-dep_Trfase
IPR015421 PyrdxlP-dep_Trfase_major
PfamiView protein in Pfam
PF00282 Pyridoxal_deC, 1 hit
SUPFAMiSSF53383 SSF53383, 1 hit
TIGRFAMsiTIGR03799 NOD_PanD_pyr, 1 hit

Sequencei

Sequence statusi: Complete.

A1S4V1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPPAVHKTAR RDEMTEKHLR KATASEDNLL RIFTVPEAAD STLGRIEQQL
60 70 80 90 100
SADLAGFLQD NIAALEQPLS DIEDHFYSVE VPPQPQFVSD YVDDIMAHLV
110 120 130 140 150
AQSVHTAAPS FIGHMTSALP YFLLPLSKLM VGLNQNLVKI ETSKAFTPME
160 170 180 190 200
RQVLGMMHHL IYGREKDFYQ GFLHSASHAL GAFCSGGTVA NITALWIARN
210 220 230 240 250
QLLKARGNFR GVTREGLHKA LKHYGWDDLA ILVSERGHYS LGKAADLLGI
260 270 280 290 300
GRDNIISVPV DAHNKVDIDA MRVAAAQLQA RNIRVMAIVG VAGTTETGNV
310 320 330 340 350
DPLAEMAALA KEIDCHFHVD AAWGGATLLS EKYRYLLSGI ELADSVTIDA
360 370 380 390 400
HKQMYVPMGA GMVLFKNPSF ASAIEHHAEY ILRQGSKDLG SQTLEGSRPG
410 420 430 440 450
MAMLVHACLN IIGREGYEIL INGSLERARF FAGLIEAQTD FELISEPELC
460 470 480 490 500
LLTYRYVPAK VRLALAQAVA QHDKDKLDAI GSLLDDLTRA IQKTQREQGK
510 520 530 540 550
SFVSRTRITP KRYGNDKRTV FRVVLANPLT TEAILAAVLE EQRALASGET
560
EILQALDALC
Length:560
Mass (Da):61,510
Last modified:February 6, 2007 - v1
Checksum:i4BF4028235789912
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000507 Genomic DNA Translation: ABL99407.1

Genome annotation databases

EnsemblBacteriaiABL99407; ABL99407; Sama_1200
KEGGisaz:Sama_1200

Similar proteinsi

Entry informationi

Entry nameiA1S4V1_SHEAM
AccessioniPrimary (citable) accession number: A1S4V1
Entry historyiIntegrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: March 28, 2018
This is version 71 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health