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A1S4V1

- A1S4V1_SHEAM

UniProt

A1S4V1 - A1S4V1_SHEAM

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Protein
Submitted name:

Pyridoxal-dependent decarboxylase

Gene
Sama_1200
Organism
Shewanella amazonensis (strain ATCC BAA-1098 / SB2B)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

Cofactori

Pyridoxal phosphate By similarity.UniRule annotation

GO - Molecular functioni

  1. carboxy-lyase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. carboxylic acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciSAMA326297:GH0T-1244-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Pyridoxal-dependent decarboxylaseImported
Gene namesi
Ordered Locus Names:Sama_1200Imported
OrganismiShewanella amazonensis (strain ATCC BAA-1098 / SB2B)Imported
Taxonomic identifieri326297 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000009175: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi326297.Sama_1200.

Structurei

3D structure databases

ProteinModelPortaliA1S4V1.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000282553.
KOiK01580.
OMAiGMMHNLV.
OrthoDBiEOG6MSRZP.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

Sequencei

Sequence statusi: Complete.

A1S4V1-1 [UniParc]FASTAAdd to Basket

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MPPAVHKTAR RDEMTEKHLR KATASEDNLL RIFTVPEAAD STLGRIEQQL    50
SADLAGFLQD NIAALEQPLS DIEDHFYSVE VPPQPQFVSD YVDDIMAHLV 100
AQSVHTAAPS FIGHMTSALP YFLLPLSKLM VGLNQNLVKI ETSKAFTPME 150
RQVLGMMHHL IYGREKDFYQ GFLHSASHAL GAFCSGGTVA NITALWIARN 200
QLLKARGNFR GVTREGLHKA LKHYGWDDLA ILVSERGHYS LGKAADLLGI 250
GRDNIISVPV DAHNKVDIDA MRVAAAQLQA RNIRVMAIVG VAGTTETGNV 300
DPLAEMAALA KEIDCHFHVD AAWGGATLLS EKYRYLLSGI ELADSVTIDA 350
HKQMYVPMGA GMVLFKNPSF ASAIEHHAEY ILRQGSKDLG SQTLEGSRPG 400
MAMLVHACLN IIGREGYEIL INGSLERARF FAGLIEAQTD FELISEPELC 450
LLTYRYVPAK VRLALAQAVA QHDKDKLDAI GSLLDDLTRA IQKTQREQGK 500
SFVSRTRITP KRYGNDKRTV FRVVLANPLT TEAILAAVLE EQRALASGET 550
EILQALDALC 560
Length:560
Mass (Da):61,510
Last modified:February 6, 2007 - v1
Checksum:i4BF4028235789912
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000507 Genomic DNA. Translation: ABL99407.1.
RefSeqiYP_927077.1. NC_008700.1.

Genome annotation databases

EnsemblBacteriaiABL99407; ABL99407; Sama_1200.
GeneIDi4603452.
KEGGisaz:Sama_1200.
PATRICi23451039. VBISheAma74963_1240.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000507 Genomic DNA. Translation: ABL99407.1 .
RefSeqi YP_927077.1. NC_008700.1.

3D structure databases

ProteinModelPortali A1S4V1.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 326297.Sama_1200.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABL99407 ; ABL99407 ; Sama_1200 .
GeneIDi 4603452.
KEGGi saz:Sama_1200.
PATRICi 23451039. VBISheAma74963_1240.

Phylogenomic databases

eggNOGi COG0076.
HOGENOMi HOG000282553.
KOi K01580.
OMAi GMMHNLV.
OrthoDBi EOG6MSRZP.

Enzyme and pathway databases

BioCyci SAMA326297:GH0T-1244-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-1098 / SB2B.

Entry informationi

Entry nameiA1S4V1_SHEAM
AccessioniPrimary (citable) accession number: A1S4V1
Entry historyi
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: May 14, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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