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A1S4V1

- A1S4V1_SHEAM

UniProt

A1S4V1 - A1S4V1_SHEAM

Protein
Submitted name:

Pyridoxal-dependent decarboxylase

Gene

Sama_1200

Organism
Shewanella amazonensis (strain ATCC BAA-1098 / SB2B)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 51 (01 Oct 2014)
      Sequence version 1 (06 Feb 2007)
      Previous versions | rss
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    Functioni

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. carboxy-lyase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. carboxylic acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotation

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciSAMA326297:GH0T-1244-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Pyridoxal-dependent decarboxylaseImported
    Gene namesi
    Ordered Locus Names:Sama_1200Imported
    OrganismiShewanella amazonensis (strain ATCC BAA-1098 / SB2B)Imported
    Taxonomic identifieri326297 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
    ProteomesiUP000009175: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi326297.Sama_1200.

    Structurei

    3D structure databases

    ProteinModelPortaliA1S4V1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0076.
    HOGENOMiHOG000282553.
    KOiK01580.
    OMAiGMMHNLV.
    OrthoDBiEOG6MSRZP.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A1S4V1-1 [UniParc]FASTAAdd to Basket

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    MPPAVHKTAR RDEMTEKHLR KATASEDNLL RIFTVPEAAD STLGRIEQQL    50
    SADLAGFLQD NIAALEQPLS DIEDHFYSVE VPPQPQFVSD YVDDIMAHLV 100
    AQSVHTAAPS FIGHMTSALP YFLLPLSKLM VGLNQNLVKI ETSKAFTPME 150
    RQVLGMMHHL IYGREKDFYQ GFLHSASHAL GAFCSGGTVA NITALWIARN 200
    QLLKARGNFR GVTREGLHKA LKHYGWDDLA ILVSERGHYS LGKAADLLGI 250
    GRDNIISVPV DAHNKVDIDA MRVAAAQLQA RNIRVMAIVG VAGTTETGNV 300
    DPLAEMAALA KEIDCHFHVD AAWGGATLLS EKYRYLLSGI ELADSVTIDA 350
    HKQMYVPMGA GMVLFKNPSF ASAIEHHAEY ILRQGSKDLG SQTLEGSRPG 400
    MAMLVHACLN IIGREGYEIL INGSLERARF FAGLIEAQTD FELISEPELC 450
    LLTYRYVPAK VRLALAQAVA QHDKDKLDAI GSLLDDLTRA IQKTQREQGK 500
    SFVSRTRITP KRYGNDKRTV FRVVLANPLT TEAILAAVLE EQRALASGET 550
    EILQALDALC 560
    Length:560
    Mass (Da):61,510
    Last modified:February 6, 2007 - v1
    Checksum:i4BF4028235789912
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000507 Genomic DNA. Translation: ABL99407.1.
    RefSeqiYP_927077.1. NC_008700.1.

    Genome annotation databases

    EnsemblBacteriaiABL99407; ABL99407; Sama_1200.
    GeneIDi4603452.
    KEGGisaz:Sama_1200.
    PATRICi23451039. VBISheAma74963_1240.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000507 Genomic DNA. Translation: ABL99407.1 .
    RefSeqi YP_927077.1. NC_008700.1.

    3D structure databases

    ProteinModelPortali A1S4V1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 326297.Sama_1200.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABL99407 ; ABL99407 ; Sama_1200 .
    GeneIDi 4603452.
    KEGGi saz:Sama_1200.
    PATRICi 23451039. VBISheAma74963_1240.

    Phylogenomic databases

    eggNOGi COG0076.
    HOGENOMi HOG000282553.
    KOi K01580.
    OMAi GMMHNLV.
    OrthoDBi EOG6MSRZP.

    Enzyme and pathway databases

    BioCyci SAMA326297:GH0T-1244-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC BAA-1098 / SB2BImported.

    Entry informationi

    Entry nameiA1S4V1_SHEAM
    AccessioniPrimary (citable) accession number: A1S4V1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 6, 2007
    Last sequence update: February 6, 2007
    Last modified: October 1, 2014
    This is version 51 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3