A1S4A7 (A1S4A7_SHEAM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Diguanylate cyclase/phosphodiesterase EMBL ABL99213.1

Gene names

Ordered Locus Names:

Sama_1006

Organism

Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) [Complete proteome] [HAMAP] EMBL ABL99213.1

Taxonomic identifier

326297 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length	494 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABL99213.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cyclic nucleotide biosynthetic process Inferred from electronic annotation. Source: InterPro intracellular signal transduction Inferred from electronic annotation. Source: InterPro
Molecular function	phosphorus-oxygen lyase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 26	26	Potential EMBL ABL99213.1
	Chain	27 – 494	468	Potential EMBL ABL99213.1		PRO_5000205100

Sequences

	Sequence		Length	Mass (Da)
	A1S4A7 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: C4B7878D5CF955B0	FASTA	494	56,277
	10 20 30 40 50 60 MVYLIAFLAA CLFLLAWLWY RYSRSTELFL HRLTQELLSK GEQRQPLMLT DIPESFSALV 70 80 90 100 110 120 QAIQHVLLHT PLHTTKDKLT GLPNRVGFKR AITHSMPLTS GTLVLIDLYR FRYVNDLFGF 130 140 150 160 170 180 AFGDTLLQLF ADRLRLMPKK PRQMARMNGD EFLLYFDTCL DEKGLLEIKQ LLQQPFSIQD 190 200 210 220 230 240 TPVSVRLQMG YVQLAQHHAD VSQMLRRADL ALKRARSDKD MLAAYQQDDD ISQRRELFII 250 260 270 280 290 300 NSLPKALAHN QLYLVYQPKE SLHHGGCEQV EALIRWEHPD LGLISPAEFI PLAEYAGMID 310 320 330 340 350 360 LVSAWALEQV LMQQVRWRAE GIHIRVAVNL SVEDMQEGNL PTMVQAALAR YQLPGEVLAL 370 380 390 400 410 420 EITESTLMSN LARATENIVK LREMGVKVAI DDFGTGHSSL AYLKDLPADE VKIDRAFLDG 430 440 450 460 470 480 IMEQERARNI MTTSIQLAKR LGFEVTVEGV ESDALRKMLA AMGADNIQGQ YFARPMRALE 490 LEMDLRRLGI ARRA

References

[1]

"Complete sequence of Shewanella amazonensis SB2B." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Fredrickson J., Richardson P. Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-1098 / SB2B.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000507 Genomic DNA. Translation: ABL99213.1.
RefSeq	YP_926883.1. NC_008700.1.
3D structure databases
ProteinModelPortal	A1S4A7.
ModBase	Search...
Protein-protein interaction databases
STRING	A1S4A7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4603258.
GenomeReviews	Gene locus Sama_1006 in contig CP000507_GR.
KEGG	saz:Sama_1006.
NMPDR	fig|326297.7.peg.946.
PATRIC	23450623. VBISheAma74963_1040.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2200.
HOGENOM	HBG751764.
OMA	LIARMNE.
ProtClustDB	CLSK906167.
Family and domain databases
InterPro	IPR001054. A/G_cyclase. IPR000160. Diguanylate_cyclase-pred. IPR001633. Diguanylate_PEstase_EAL_dom. [Graphical view]
Gene3D	G3DSA:3.20.20.450. G3DSA:3.20.20.450. 1 hit.
Pfam	PF00563. EAL. 1 hit. PF00990. GGDEF. 1 hit. [Graphical view]
SMART	SM00052. EAL. 1 hit. SM00267. GGDEF. 1 hit. [Graphical view]
SUPFAM	SSF55073. A/G_cyclase. 1 hit. SSF141868. SSF141868. 1 hit.
TIGRFAMs	TIGR00254. GGDEF. 1 hit.
PROSITE	PS50883. EAL. 1 hit. PS50887. GGDEF. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A1S4A7_SHEAM

Accession

Primary (citable) accession number: A1S4A7

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	December 14, 2011
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)