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A1S477

- DEOD_SHEAM

UniProt

A1S477 - DEOD_SHEAM

Protein

Purine nucleoside phosphorylase DeoD-type

Gene

deoD

Organism
Shewanella amazonensis (strain ATCC BAA-1098 / SB2B)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 51 (01 Oct 2014)
      Sequence version 1 (06 Feb 2007)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate.UniRule annotation
    Purine deoxynucleoside + phosphate = purine + 2'-deoxy-alpha-D-ribose 1-phosphate.UniRule annotation

    GO - Molecular functioni

    1. purine-nucleoside phosphorylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. purine nucleoside metabolic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Enzyme and pathway databases

    BioCyciSAMA326297:GH0T-1012-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Purine nucleoside phosphorylase DeoD-typeUniRule annotation (EC:2.4.2.1UniRule annotation)
    Short name:
    PNPUniRule annotation
    Gene namesi
    Name:deoDUniRule annotation
    Ordered Locus Names:Sama_0976
    OrganismiShewanella amazonensis (strain ATCC BAA-1098 / SB2B)
    Taxonomic identifieri326297 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
    ProteomesiUP000009175: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 236236Purine nucleoside phosphorylase DeoD-typePRO_1000069640Add
    BLAST

    Interactioni

    Subunit structurei

    Homohexamer.UniRule annotation

    Protein-protein interaction databases

    STRINGi326297.Sama_0976.

    Structurei

    3D structure databases

    ProteinModelPortaliA1S477.
    SMRiA1S477. Positions 2-234.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the PNP/UDP phosphorylase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0813.
    HOGENOMiHOG000274896.
    KOiK03784.
    OMAiECYNEVR.
    OrthoDBiEOG6BKJC5.

    Family and domain databases

    Gene3Di3.40.50.1580. 1 hit.
    HAMAPiMF_01627. Pur_nucleosid_phosp.
    InterProiIPR004402. DeoD-type.
    IPR018017. Nucleoside_phosphorylase.
    IPR018016. Nucleoside_phosphorylase_CS.
    IPR000845. Nucleoside_phosphorylase_d.
    [Graphical view]
    PANTHERiPTHR21234. PTHR21234. 1 hit.
    PfamiPF01048. PNP_UDP_1. 1 hit.
    [Graphical view]
    SUPFAMiSSF53167. SSF53167. 1 hit.
    TIGRFAMsiTIGR00107. deoD. 1 hit.
    PROSITEiPS01232. PNP_UDP_1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A1S477-1 [UniParc]FASTAAdd to Basket

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    MATPHINAVE GAFAETVLFP GDPLRAKYIA ETFLENVEQV TDVRNMLGFT    50
    GTYKGKRISV MGSGMGIPSC SIYATELIKD YGVKNLIRVG TCGAISTDVK 100
    VRDVIIGMGA CTDSQVNRLR FKGQDFAAIA DYSLLSAVVE SAKTHGIQTR 150
    VGNVFSADLF YTPDPEMFDV MEKMGVLGVE MEAAGLYGVA HEFGARALCV 200
    VTVSDHIRTG EKTTSDERQT TFNDMIIMTL DAAINL 236
    Length:236
    Mass (Da):25,527
    Last modified:February 6, 2007 - v1
    Checksum:i95CF683253AE8A43
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000507 Genomic DNA. Translation: ABL99183.1.
    RefSeqiWP_011759092.1. NC_008700.1.
    YP_926853.1. NC_008700.1.

    Genome annotation databases

    EnsemblBacteriaiABL99183; ABL99183; Sama_0976.
    GeneIDi4603228.
    KEGGisaz:Sama_0976.
    PATRICi23450563. VBISheAma74963_1010.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000507 Genomic DNA. Translation: ABL99183.1 .
    RefSeqi WP_011759092.1. NC_008700.1.
    YP_926853.1. NC_008700.1.

    3D structure databases

    ProteinModelPortali A1S477.
    SMRi A1S477. Positions 2-234.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 326297.Sama_0976.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABL99183 ; ABL99183 ; Sama_0976 .
    GeneIDi 4603228.
    KEGGi saz:Sama_0976.
    PATRICi 23450563. VBISheAma74963_1010.

    Phylogenomic databases

    eggNOGi COG0813.
    HOGENOMi HOG000274896.
    KOi K03784.
    OMAi ECYNEVR.
    OrthoDBi EOG6BKJC5.

    Enzyme and pathway databases

    BioCyci SAMA326297:GH0T-1012-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.1580. 1 hit.
    HAMAPi MF_01627. Pur_nucleosid_phosp.
    InterProi IPR004402. DeoD-type.
    IPR018017. Nucleoside_phosphorylase.
    IPR018016. Nucleoside_phosphorylase_CS.
    IPR000845. Nucleoside_phosphorylase_d.
    [Graphical view ]
    PANTHERi PTHR21234. PTHR21234. 1 hit.
    Pfami PF01048. PNP_UDP_1. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53167. SSF53167. 1 hit.
    TIGRFAMsi TIGR00107. deoD. 1 hit.
    PROSITEi PS01232. PNP_UDP_1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC BAA-1098 / SB2B.

    Entry informationi

    Entry nameiDEOD_SHEAM
    AccessioniPrimary (citable) accession number: A1S477
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 5, 2008
    Last sequence update: February 6, 2007
    Last modified: October 1, 2014
    This is version 51 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3