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Protein
Submitted name:

Fumarase

Gene

Sama_0789

Organism
Shewanella amazonensis (strain ATCC BAA-1098 / SB2B)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseSAAS annotationImported

Enzyme and pathway databases

BioCyciSAMA326297:GH0T-819-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
FumaraseImported (EC:4.2.1.2Imported)
Gene namesi
Ordered Locus Names:Sama_0789Imported
OrganismiShewanella amazonensis (strain ATCC BAA-1098 / SB2B)Imported
Taxonomic identifieri326297 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000009175 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi326297.Sama_0789.

Structurei

3D structure databases

ProteinModelPortaliA1S3P0.
SMRiA1S3P0. Positions 2-455.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini14 – 342329Lyase_1InterPro annotationAdd
BLAST
Domaini408 – 46053FumaraseC_CInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4108IJ0. Bacteria.
COG1027. LUCA.
HOGENOMiHOG000061737.
KOiK01744.
OMAiEICENYV.
OrthoDBiEOG6V1M4M.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
InterProiIPR024083. Fumarase/histidase_N.
IPR018951. Fumarase_C_C.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF10415. FumaraseC_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A1S3P0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDTRIEHDLL GDAPVPAQAW YGIQTQRALE NFSLSGTPIN AFPELIRALA
60 70 80 90 100
KVKAAAARAN QSLGQLSDIK ANAIAAACDD IVQGALHDQF VVDLIQGGAG
110 120 130 140 150
TSTNMNANEV IANLALAKLG HGKGEYRHLH PNNDVNCSQS TNDAYPTAAR
160 170 180 190 200
LAMVEATAPL KVAIEAICLS LEVKGREFSH ILKMGRTQLQ DAVPMTLGQE
210 220 230 240 250
FDAFASSLKS DIGRIDDACK ELCVVNLGGT AIGTGINTHP AYGVLAVKAL
260 270 280 290 300
ADITGLPVTQ ADNLIDATTD MGAFVTLSSV LKRLAVKLSK LSNDLRLLSS
310 320 330 340 350
GPRTGLGEIR LPAMQPGSSI MPGKVNPVIP EAVNQVAFQV IGTDMTITMA
360 370 380 390 400
AEAAQLQLNA MEPVIVYNLL NNCALLTRAI AMLDSRCIQG IEANEAKCEQ
410 420 430 440 450
HVSSSIGIVT ALVPHIGYEN ATRIAGEALL SGAGVAELVR RDGLLSDDAL
460 470
SQILSPAAMV TPVELTGAAK AH
Length:472
Mass (Da):49,472
Last modified:February 6, 2007 - v1
Checksum:iEE61E2AC5E9D7BC2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000507 Genomic DNA. Translation: ABL98996.1.
RefSeqiWP_011758906.1. NC_008700.1.

Genome annotation databases

EnsemblBacteriaiABL98996; ABL98996; Sama_0789.
KEGGisaz:Sama_0789.
PATRICi23450175. VBISheAma74963_0821.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000507 Genomic DNA. Translation: ABL98996.1.
RefSeqiWP_011758906.1. NC_008700.1.

3D structure databases

ProteinModelPortaliA1S3P0.
SMRiA1S3P0. Positions 2-455.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi326297.Sama_0789.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABL98996; ABL98996; Sama_0789.
KEGGisaz:Sama_0789.
PATRICi23450175. VBISheAma74963_0821.

Phylogenomic databases

eggNOGiENOG4108IJ0. Bacteria.
COG1027. LUCA.
HOGENOMiHOG000061737.
KOiK01744.
OMAiEICENYV.
OrthoDBiEOG6V1M4M.

Enzyme and pathway databases

BioCyciSAMA326297:GH0T-819-MONOMER.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
InterProiIPR024083. Fumarase/histidase_N.
IPR018951. Fumarase_C_C.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF10415. FumaraseC_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-1098 / SB2BImported.

Entry informationi

Entry nameiA1S3P0_SHEAM
AccessioniPrimary (citable) accession number: A1S3P0
Entry historyi
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: March 16, 2016
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.