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Protein
Submitted name:

Beta-mannosidase

Gene

Sama_0302

Organism
Shewanella amazonensis (strain ATCC BAA-1098 / SB2B)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciSAMA326297:GH0T-323-MONOMER.

Protein family/group databases

CAZyiGH2. Glycoside Hydrolase Family 2.

Names & Taxonomyi

Protein namesi
Submitted name:
Beta-mannosidaseImported (EC:3.2.1.25Imported)
Gene namesi
Ordered Locus Names:Sama_0302Imported
OrganismiShewanella amazonensis (strain ATCC BAA-1098 / SB2B)Imported
Taxonomic identifieri326297 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000009175 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi326297.Sama_0302.

Structurei

3D structure databases

ProteinModelPortaliA1S2A7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini76 – 140Glyco_hydro_2_NInterPro annotationAdd BLAST65
Domaini209 – 320Glyco_hydro_2InterPro annotationAdd BLAST112

Sequence similaritiesi

Belongs to the glycosyl hydrolase 2 family.SAAS annotation

Phylogenomic databases

eggNOGiENOG4105D6I. Bacteria.
COG3250. LUCA.
HOGENOMiHOG000186861.
KOiK01192.
OMAiSCIDYYK.
OrthoDBiPOG091H06CS.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
2.60.40.320. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR008979. Galactose-bd-like.
IPR013812. Glyco_hydro_2/20_Ig-like.
IPR006102. Glyco_hydro_2_Ig-like.
IPR006104. Glyco_hydro_2_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF00703. Glyco_hydro_2. 1 hit.
PF02837. Glyco_hydro_2_N. 1 hit.
[Graphical view]
SUPFAMiSSF49303. SSF49303. 3 hits.
SSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

A1S2A7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTHSFEPFG QSLNSLGQSM DLGGQWQFRQ QGKAEWLPAQ VPGCNFTDLL
60 70 80 90 100
ANGLIDDPFY RDNEEKLQWI EQEDWQYRKT FSLDTDWWQN DEVQLVADGL
110 120 130 140 150
DTYCDLYLNG HKLGDSRNMF IGQRISCKSL LKVGENLLEI HFRSPIKETL
160 170 180 190 200
PLHQAAGFTY PAENDKSVEK LSVYNRKAPC HFGWDWGPRF VTSGIWRAIG
210 220 230 240 250
LQGIKRGRID GVHFVQHSLS SDKAEFSFDV SLALCNTDNQ EGELSLRVAC
260 270 280 290 300
PAAPELNREV PLNRDVPLTE QSALRLDFEL TNPNLWWPNG LGEAHLYEFH
310 320 330 340 350
FTLLAGDEPL AQHSQAVGLR TLEVINEADG MGQSFYLRVN GQPVFMKGAN
360 370 380 390 400
YIPGDSFIHR MTPDRHQADF DAVVDANMNM LRVWGGGVYQ DEVFYRLADE
410 420 430 440 450
NGILIWQDFM FACSLYPADE AFLDNVREEA VYNIKRLRNH PCLALWCGNN
460 470 480 490 500
EVDMGIKHWQ WPEKFGYSDE LYARLKNDYI RLFDECLPGA VAELDAGRFY
510 520 530 540 550
LRSSPIGFWE EDMDHIGNHH YWGVWHGEEP FSEYQKRIPR FMSEFGFQSF
560 570 580 590 600
PLASSMARFT EETDWHLESS VLRVHQKHPR GNKLIRSYME QEYRDPENFP
610 620 630 640 650
RLLFLSQVQQ AEGLKLAFEA HRAARPFCMG SLYWQLNDTW PAASWSGIDY
660 670 680 690 700
YGRWKALHYQ AKRSFRTDLL VVDEVDGAVR VRLVSDRLKS VKARLVLELL
710 720 730 740 750
DFDGNCLWQE QQALDTPKNT STQVCQLERA SLLGEHNPCQ LMLRGRLLDE
760 770 780 790 800
QGQLLTDCLY YFVPSKDLAL KTPALTLEPS FDAEGLRLTL NTNTLIRQCH
810 820 830 840 850
LELPEVAGNC SGHCSGNFSD NFFDLVPGEP KCIHIALLGM DEDTKAALVK
860
GIRCQSLVQE ETQ
Length:863
Mass (Da):98,998
Last modified:February 6, 2007 - v1
Checksum:i8CE5C0790CD498CE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000507 Genomic DNA. Translation: ABL98513.1.
RefSeqiWP_011758423.1. NC_008700.1.

Genome annotation databases

EnsemblBacteriaiABL98513; ABL98513; Sama_0302.
KEGGisaz:Sama_0302.
PATRICi23449143. VBISheAma74963_0314.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000507 Genomic DNA. Translation: ABL98513.1.
RefSeqiWP_011758423.1. NC_008700.1.

3D structure databases

ProteinModelPortaliA1S2A7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi326297.Sama_0302.

Protein family/group databases

CAZyiGH2. Glycoside Hydrolase Family 2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABL98513; ABL98513; Sama_0302.
KEGGisaz:Sama_0302.
PATRICi23449143. VBISheAma74963_0314.

Phylogenomic databases

eggNOGiENOG4105D6I. Bacteria.
COG3250. LUCA.
HOGENOMiHOG000186861.
KOiK01192.
OMAiSCIDYYK.
OrthoDBiPOG091H06CS.

Enzyme and pathway databases

BioCyciSAMA326297:GH0T-323-MONOMER.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
2.60.40.320. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR008979. Galactose-bd-like.
IPR013812. Glyco_hydro_2/20_Ig-like.
IPR006102. Glyco_hydro_2_Ig-like.
IPR006104. Glyco_hydro_2_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF00703. Glyco_hydro_2. 1 hit.
PF02837. Glyco_hydro_2_N. 1 hit.
[Graphical view]
SUPFAMiSSF49303. SSF49303. 3 hits.
SSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiA1S2A7_SHEAM
AccessioniPrimary (citable) accession number: A1S2A7
Entry historyi
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: September 7, 2016
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.