A1S2A5 (A1S2A5_SHEAM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycoside hydrolase, family 85 EMBL ABL98511.1

Gene names

Ordered Locus Names:

Sama_0300

Organism

Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) [Complete proteome] [HAMAP] EMBL ABL98511.1

Taxonomic identifier

326297 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length	592 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABL98511.1
Molecular function	Hydrolase EMBL ABL98511.1
Technical term	Complete proteome
Gene Ontology (GO)
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 24	24	Potential EMBL ABL98511.1
	Chain	25 – 592	568	Potential EMBL ABL98511.1		PRO_5000204909

Sequences

	Sequence		Length	Mass (Da)
	A1S2A5 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: 141B80A132761CC4	FASTA	592	64,257
	10 20 30 40 50 60 MKKSALSLAL LLAGLCLPAV TFADPQPGTE KVAGGILDSQ PPFALTIAQA KAWSPKGATA 70 80 90 100 110 120 DSRNVSQVPL ASRFSAPLAG QKVSEAKVLY APDGMNNFAN YLDTQGQFNL YNFTHWSQID 130 140 150 160 170 180 VLNWFAGTAD LGVQIPARPW VETAHKNGVK VIGSVFLGVA QWGGSADKVE ALLEQDATGN 190 200 210 220 230 240 FIVADKLIQM ARFYGFDGWL INQETDLTAV KDADNNLLAD KSDPVRGREL AARMLAFVQY 250 260 270 280 290 300 LTANAPQGME IHWYDAMIAS GEVRWQNQLN EHNRVYLQDS AQDGSQGGLQ NKVRSSDAIF 310 320 330 340 350 360 LNYWWNKDMV RASVQEAKAL GRSPYDVYVG ADLWPSRNAQ RAFSRHQWLD WLFDDGEALT 370 380 390 400 410 420 SIALFAPNVN FNFDGEPHTP PFSNFRNDPG DAARFYATEV RLFAGDDMNL ATADEAGWKG 430 440 450 460 470 480 VGAYLPAKST LNSLPFRTSF NTGQGKQWVE KGEVKGGAWT DMGRQDFLPT WQFAGEGALK 490 500 510 520 530 540 LSFDFDTVYQ GGSSLAVTAK GAATAPLYAL DVMLSESSQL TLISQGQAKG LSLYVETADG 550 560 570 580 590 EKLSLVLGDH ADWTSQSLGL SGLKGKKLVV IALQADGSAS INAHLGHLEL LP

References

[1]

"Complete sequence of Shewanella amazonensis SB2B." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Fredrickson J., Richardson P. Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-1098 / SB2B.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000507 Genomic DNA. Translation: ABL98511.1.
RefSeq	YP_926181.1. NC_008700.1.
3D structure databases
ProteinModelPortal	A1S2A5.
ModBase	Search...
Protein-protein interaction databases
STRING	A1S2A5.
Protein family/group databases
CAZy	GH85. Glycoside Hydrolase Family 85.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4602556.
GenomeReviews	Gene locus Sama_0300 in contig CP000507_GR.
KEGG	saz:Sama_0300.
NMPDR	fig|326297.7.peg.289.
PATRIC	23449139. VBISheAma74963_0312.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG4724.
HOGENOM	HBG208874.
OMA	FANYLDT.
ProtClustDB	CLSK776469.
Family and domain databases
InterPro	IPR005201. Glyco_hydro_85. [Graphical view]
Pfam	PF03644. Glyco_hydro_85. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A1S2A5_SHEAM

Accession

Primary (citable) accession number: A1S2A5

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)