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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Shewanella amazonensis (strain ATCC BAA-1098 / SB2B)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotationSAAS annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

Cofactori

Mg2+UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei147 – 1471UniRule annotation
Active sitei554 – 5541UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, PyruvateImported

Enzyme and pathway databases

BioCyciSAMA326297:GH0T-275-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotationSAAS annotation (EC:4.1.1.31UniRule annotationSAAS annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
Ordered Locus Names:Sama_0254Imported
OrganismiShewanella amazonensis (strain ATCC BAA-1098 / SB2B)Imported
Taxonomic identifieri326297 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000009175: Chromosome

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Protein-protein interaction databases

STRINGi326297.Sama_0254.

Structurei

3D structure databases

ProteinModelPortaliA1S259.
SMRiA1S259. Positions 14-887.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238648.
KOiK01595.
OMAiCGMGVIA.
OrthoDBiEOG6TJ7T8.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A1S259-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTDVKGTEKV TDMYAQLRAN VGMMGQILGD TMKEHLGEAF LDKVEQIRLL
60 70 80 90 100
AKGSRSGDDE ARAKMLALLG QLPDEELVPF AKAFNQFLNL ANIAEQFHTI
110 120 130 140 150
SRNCDELVCV PDPVEQLLGR MLGSQVDKKE MLATLKTLDI DLVLTAHPTE
160 170 180 190 200
ISRRTLIQKY SAIVDCLHDL ENPQLTEREH KSQTLRLRQL IAQIWHTNEI
210 220 230 240 250
RRERPTPVDE ARWGLSTIET SLWHAVPDFL RQLNDQVEEA TGTQIPTDMA
260 270 280 290 300
PVRFSSWMGG DRDGNPFVTA RVTAEVLDRN RHTAARLYLK DVVELVGELS
310 320 330 340 350
MEEANAELMA YSNNSCEPYR DVLRSLRSKL RNTIDFLNAR LEGHNPEVAR
360 370 380 390 400
DEIIWEQQDL ETPLKLLYKS LCDSGMRLIA NGRLLDMLRR LACFGIHMLR
410 420 430 440 450
LDIRQDAGRH EAAIAELTRY LGLGDYAHWS EAEKQAFLLK ELSGRRPLIP
460 470 480 490 500
GNWKPSDEVA EVLATCRLVG TQPQQALGSY VISMASLPSD VLAVLLLLKE
510 520 530 540 550
SGCNYPIRVV PLFETLDDLN NAAACITALL DIDWYRGYTK GMQEVMIGYS
560 570 580 590 600
DSAKDAGVMA AAWAQYRAQE QLVKVCNKAG VKLTLFHGRG GTIGRGGGPA
610 620 630 640 650
HKAILSQPPG SVDGRIRVTE QGEMIRFKFG LPKLAVQSLA LYTSAVLEAT
660 670 680 690 700
LLPPPEPKQE WRNAMQRIAD ESVEAYRGIV RQEPDFVPYF RAATPEVELG
710 720 730 740 750
KLPLGSRPAK RRVDGGIESL RAIPWIFAWS QNRLMLPAWL GAGEALKAAA
760 770 780 790 800
DRGELGLLRE MEQDWPFFNT RISMLEMVYS KAEPNLARYY EQCLVPEALH
810 820 830 840 850
HLGVTLRERL ALGVEAVLAL TGEDSLMAHT PWNRESVRLR NPYIDPLNFL
860 870 880
QAELLGRTRR EETPSESVQL ALMLTIAGVA AGMRNTG
Length:887
Mass (Da):99,321
Last modified:February 6, 2007 - v1
Checksum:i548A59E60C0BA35D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000507 Genomic DNA. Translation: ABL98465.1.
RefSeqiYP_926135.1. NC_008700.1.

Genome annotation databases

EnsemblBacteriaiABL98465; ABL98465; Sama_0254.
GeneIDi4602510.
KEGGisaz:Sama_0254.
PATRICi23449043. VBISheAma74963_0264.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000507 Genomic DNA. Translation: ABL98465.1.
RefSeqiYP_926135.1. NC_008700.1.

3D structure databases

ProteinModelPortaliA1S259.
SMRiA1S259. Positions 14-887.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi326297.Sama_0254.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABL98465; ABL98465; Sama_0254.
GeneIDi4602510.
KEGGisaz:Sama_0254.
PATRICi23449043. VBISheAma74963_0264.

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238648.
KOiK01595.
OMAiCGMGVIA.
OrthoDBiEOG6TJ7T8.

Enzyme and pathway databases

BioCyciSAMA326297:GH0T-275-MONOMER.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-1098 / SB2BImported.

Entry informationi

Entry nameiA1S259_SHEAM
AccessioniPrimary (citable) accession number: A1S259
Entry historyi
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: February 4, 2015
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.