A1S1W2 (A1S1W2_SHEAM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycosyl hydrolase, family 31/fibronectin type III domain protein EMBL ABL98368.1

Gene names

Ordered Locus Names:

Sama_0156

Organism

Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) [Complete proteome] [HAMAP] EMBL ABL98368.1

Taxonomic identifier

326297 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella

Protein attributes

Sequence length	1108 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABL98368.1
Molecular function	Hydrolase EMBL ABL98368.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro cell adhesion Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 38	38	Potential EMBL ABL98368.1
	Chain	39 – 1108	1070	Potential EMBL ABL98368.1		PRO_5000204880

Sequences

	Sequence		Length	Mass (Da)
	A1S1W2 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: 96082051F2E661C5	FASTA	1,108	121,649
	10 20 30 40 50 60 MASLSPSFSP WRSRARLSPL ALAVALVIAP IGFTANAAPV GKLDTLRQEG ASVDIRTDSG 70 80 90 100 110 120 ALVQVSVLKP SLIRIQAGAN GKLTAEGSKA AAIVIKDDYP AVAYTLSDEG DYRLLKTEAL 130 140 150 160 170 180 ALRIYEAPLR FALYQADNQT LITEELQSLE LGESSTVQTL STDVDERFFG GGQQNGAFEF 190 200 210 220 230 240 KGKSLEISYS GGWEEGDRPS PAPFYLSSKG YGVLRNTWAN GSYDFRSSDA LRLGHDEARF 250 260 270 280 290 300 DAFFFAPGSI QQVLADYTEL TGRARLIPRW AFEYGDADCY NDGDNVKKPG TVPDGWSDGP 310 320 330 340 350 360 TGTTPDVIDS VAKKYREHDM PGGWILPNDG YGCGYTDLPK VVEGLAKYGF RTGLWTEDGV 370 380 390 400 410 420 DKIAWEVGKA GTRAQKLDVA WTGEGYQHAL DANKAAADGI LDNSDSRPFL WTVMGWAGMQ 430 440 450 460 470 480 RYAVTWTGDQ SGSWDYIRWH IPTLIGSGLS GQAYATGDVD AIFGGSPETF TRDLQWKAFT 490 500 510 520 530 540 PVLMGMSGWS KAARKHPWWF DEPYRSINRD YLKLKMRLTP YMYTTAFETE QTGAPIVRGL 550 560 570 580 590 600 MWDYNDDPNA NTEAHKYQFL LGKDMLVAPV YRSQTASKGW REDVYLPKGQ WIDYWDGRVV 610 620 630 640 650 660 DAPEGGASID YQVDLNTIPV FVRAGAIIPM YPEALYDGHK PKDVLTLDIY PYGESEYLMY 670 680 690 700 710 720 EDDGNTRRYQ QGEFARQLFA VKAHEGKAGD IEVSIGAAEG KFDGQDEERV YELWLHTRTK 730 740 750 760 770 780 PDSVLLNGKK LKALKDEAAL AKAKSGWTYS DTKYGTVLVK VAKTSVREAL EIKLEIDDAK 790 800 810 820 830 840 VLAATAGYSV APELGNEIPA DSLLVLGRPA EESGHPLENA FDGNPDTWFR TKRDQAQKTG 850 860 870 880 890 900 AHEFTLALGE RRFIAGFEIA PRNDKHWEYG QVADYEVYLG ENNGEWGEPV AKGRLEKSQT 910 920 930 940 950 960 MQKVEFAPKP GSLLRFRILS TQNELGSDPM VTAAKGQGGA FNALLPKSVT PITISEFKVL 970 980 990 1000 1010 1020 TAPEPKAPKT QLFLAEMTPQ KLDKSAGSRV ALNSAIGGKP MSMNGLKFSK GLGMAANGRV 1030 1040 1050 1060 1070 1080 DYRLEGNWQL LRADLGIDDS CKTKGGLHFK IFGDGKLMYD SGLIEAPAVV KPELDIRGVE 1090 1100 ILSLQTEGTA KGVCGNWANA SVVGWPKG

References

[1]

"Complete sequence of Shewanella amazonensis SB2B." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Munk A.C., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J. , Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Fredrickson J., Richardson P. Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-1098 / SB2B.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000507 Genomic DNA. Translation: ABL98368.1.
RefSeq	YP_926038.1. NC_008700.1.
3D structure databases
ProteinModelPortal	A1S1W2.
ModBase	Search...
Protein-protein interaction databases
STRING	A1S1W2.
Protein family/group databases
CAZy	CBM32. Carbohydrate-Binding Module Family 32. CBM51. Carbohydrate-Binding Module Family 51. GH31. Glycoside Hydrolase Family 31.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4602413.
GenomeReviews	Gene locus Sama_0156 in contig CP000507_GR.
KEGG	saz:Sama_0156.
NMPDR	fig|326297.7.peg.147.
PATRIC	23448809. VBISheAma74963_0165.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1501.
HOGENOM	HBG701246.
OMA	STKYTGP.
PhylomeDB	A1S1W2.
ProtClustDB	CLSK962307.
Family and domain databases
InterPro	IPR000421. Coagulation_fac_5/8-C_type_dom. IPR008979. Galactose-bd-like. IPR013222. Glyco_hyd_98_carb-bd. IPR011013. Glyco_hydro-type_carb-bd. IPR000322. Glyco_hydro_31. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
PANTHER	PTHR22762. Glyco_hydro_31. 1 hit.
Pfam	PF00754. F5_F8_type_C. 1 hit. PF01055. Glyco_hydro_31. 2 hits. PF08305. NPCBM. 1 hit. [Graphical view]
SUPFAM	SSF49785. Gal_bind_like. 1 hit. SSF74650. Gal_mut_like. 1 hit. SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A1S1W2_SHEAM

Accession

Primary (citable) accession number: A1S1W2

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	December 14, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)