A1S0P3 (A1S0P3_THEPD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycoside hydrolase, family 38 EMBL ABL79023.1

Gene names

Ordered Locus Names:

Tpen_1628

Organism

Thermofilum pendens (strain Hrk 5)

Taxonomic identifier

368408 [NCBI]

Taxonomic lineage

Archaea › Crenarchaeota › Thermoprotei › Thermoproteales › Thermofilaceae › Thermofilum

Protein attributes

Sequence length	1032 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABL79023.1
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	mannose metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-mannosidase activity Inferred from electronic annotation. Source: InterPro carbohydrate binding Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1S0P3 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: 25B9E1C69F41E881	FASTA	1,032	116,079
	10 20 30 40 50 60 MKLRDAERSL FDLLVASVQR YIPLSVWRLD GREKFLPVRV QAEPGRIYEF VGKARVPSSE 70 80 90 100 110 120 HRWFAKFVLS GNATLEVDGR LVGGIDEAHT YFPLDPGLHE LRIRASPRGM FGFHDWSLSF 130 140 150 160 170 180 EKAFLAEVYW RGFSLALKLL SLVSYLKSLP PDDAVRRRVE GELFDALMSA PVSPSVLQIT 190 200 210 220 230 240 VALSLLYEGG RSFSRGDLPE RYGDYAWLSG VYGAGILGGR LRDVGASSLD DVKRACDRLE 250 260 270 280 290 300 PLLSLLEELR KSQEGAGELF IVGHSHIDAA WLWPVQETRE KVARTFANVV SLLREYGGPV 310 320 330 340 350 360 YAQSSALYYE WVEEDYPELF REIKRLVESG RWIPVGGMWV ESDVQLVEGE SLARQFLYGQ 370 380 390 400 410 420 RYFYSRFGRT ARIGWIPDSF GFPYSLPQLL VKSGLECFVT HKVLWNDTNE FPYHSFLWRG 430 440 450 460 470 480 VDGSTIPVQI LLNSYNEMLT PGSVKAYWSR YKQRGEVPFL PYAYGYGDGG GGPTREMLES 490 500 510 520 530 540 LDVVKRLPGL PRLRHLEEEE YLARLKASEG SMPVWDGELY VEFHRGTYTT NLQVKELMWR 550 560 570 580 590 600 AELALLTAEE VASLASSRTG EGLSARLERL WKTLLLHQFH DILPGSSMKE VYEDAYRDLS 610 620 630 640 650 660 MVLREASSLA REALEAYLGG GEGGVAVFNP LPWPRRAIVS LPMGMAPRGA ECQESEEGVL 670 680 690 700 710 720 VEVELPPAGY RVYSASGGCV DEGEPLRVEE VDGGILLSSG AVEVVVDRDG SLGSVRLLPG 730 740 750 760 770 780 GEEVLSRPSN QLRVHFDRPG VFDAWELTDD FLSRWEEART LSEPRLVERG RLRACVEYVK 790 800 810 820 830 840 GFGKSRVTQR VCVYRFSPVV EVKTRLEWFD KGFLVKAWMK PAFKPTAAVF ETPYGVVYRS 850 860 870 880 890 900 PAWASSIDRA KFEAPALRWV DVSDGARGFA VIAPGRHGYS VREDYVSLSL LKSPTFPNPW 910 920 930 940 950 960 SDVGEFETTY YIYPHLGGYE EARVAFVAAE LLRQPLAVAT APVERSESFL SVNPPEALLG 970 980 990 1000 1010 1020 AFKAAEDGDG YVMRLYNPHR GEVEVEVEVN VPFREAVEVD IPELRVLGRV EVSGGKLRLR 1030 LKPFEVKTVK LR

References

[1]

"Genome sequence of Thermofilum pendens reveals an exceptional loss of biosynthetic pathways without genome reduction." Anderson I., Rodriguez J., Susanti D., Porat I., Reich C., Ulrich L.E., Elkins J.G., Mavromatis K., Lykidis A., Kim E., Thompson L.S., Nolan M., Land M., Copeland A., Lapidus A., Lucas S., Detter C., Zhulin I.B. , Olsen G.J., Whitman W., Mukhopadhyay B., Bristow J., Kyrpides N. J. Bacteriol. 190:2957-2965(2008) [PubMed: 18263724] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Hrk 5.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000505 Genomic DNA. Translation: ABL79023.1.
RefSeq	YP_921026.1. NC_008698.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A1S0P3.
Protein family/group databases
CAZy	GH38. Glycoside Hydrolase Family 38.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4601031.
GenomeReviews	Gene locus Tpen_1628 in contig CP000505_GR.
KEGG	tpe:Tpen_1628.
Phylogenomic databases
eggNOG	arNOG06022.
HOGENOM	HBG391703.
OMA	WHERERF.
PhylomeDB	A1S0P3.
ProtClustDB	CLSK962292.
Enzyme and pathway databases
BioCyc	TPEN368408:TPEN_1628-MONOMER.
Family and domain databases
InterPro	IPR011013. Glyco_hydro-type_carb-bd. IPR011330. Glyco_hydro/deAcase_b/a-brl. IPR011682. Glyco_hydro_38_C. IPR015341. Glyco_hydro_38_cen_dom. IPR000602. Glyco_hydro_38_core. [Graphical view]
Gene3D	G3DSA:3.20.110.10. Glyco_hydro_38_core. 1 hit.
KO	K01191.
Pfam	PF09261. Alpha-mann_mid. 1 hit. PF01074. Glyco_hydro_38. 1 hit. PF07748. Glyco_hydro_38C. 1 hit. [Graphical view]
SMART	SM00872. Alpha-mann_mid. 1 hit. [Graphical view]
SUPFAM	SSF74650. Gal_mut_like. 1 hit. SSF88713. Glyco_hydro/deAcase_b/a-brl. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A1S0P3_THEPD

Accession

Primary (citable) accession number: A1S0P3

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	November 16, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)