A1S075 (A1S075_THEPD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha amylase, catalytic region EMBL ABL78855.1

Gene names

Ordered Locus Names:

Tpen_1458

Organism

Thermofilum pendens (strain Hrk 5)

Taxonomic identifier

368408 [NCBI]

Taxonomic lineage

Archaea › Crenarchaeota › Thermoprotei › Thermoproteales › Thermofilaceae › Thermofilum

Protein attributes

Sequence length	644 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1S075 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: C65E57A0A82BB234	FASTA	644	74,259
	10 20 30 40 50 60 MYRVLGFRDD VYLGRVVKAE FSAPREGEYA YLLGNFNAFN EGSFRMRGAG DRWVVEVELP 70 80 90 100 110 120 EGVWYYLFSL GGRRAVDPEN PETTVYSRRA YKFEERVSVA KLLGFDPASC NGFCEEALYH 130 140 150 160 170 180 YPSLTYVYPF GGVLFVRLRA LRGSLQKAFL VVDGRRLEMR LKARDEVFDY YEASLEAGGE 190 200 210 220 230 240 VSYYFEVLGG GRLHRYGEFS VDVKSLESLI RVPEWVYGSV FYQIMPDRFA EGGLEEIAER 250 260 270 280 290 300 LNHVSGLGAN ALYLTPIFES TTYHGYDVVD YYRVAGRLGG DEAFGRLLAE LKKRGMRVVL 310 320 330 340 350 360 DGVFHHTSFF HPYFQDLVEK GEESRYKGFY RVLGFPVVPR EFLEALRSGA PRHELKKYPR 370 380 390 400 410 420 RYESFFDVWL MPRLNHDNPE VRSFITGVGR YWVSRGVDGW RLDVAHGVPP ELWREFRETL 430 440 450 460 470 480 PGDVYLFGEV MDDARIWLFD KFHGAMNYLL YDAVLRFFAY REITAEEFLN RLELLSVYYG 490 500 510 520 530 540 PGEYAMYNFL DNHDVDRLLS LVGDRDKYLC ALVFLFTYKG VPSIYYGDEV GLENTDSPFM 550 560 570 580 590 600 ERSRAPMRWD ESTWDKAILE ATRALASLRR RSAALQRGAF EPVRFEGGLL VYRRRLGDES 610 620 630 640 ILVAINYSES EAVLEEPAQS VLFRSGSVKE KLLGPFSSVV AGDR

References

[1]

"Genome sequence of Thermofilum pendens reveals an exceptional loss of biosynthetic pathways without genome reduction." Anderson I., Rodriguez J., Susanti D., Porat I., Reich C., Ulrich L.E., Elkins J.G., Mavromatis K., Lykidis A., Kim E., Thompson L.S., Nolan M., Land M., Copeland A., Lapidus A., Lucas S., Detter C., Zhulin I.B. , Olsen G.J., Whitman W., Mukhopadhyay B., Bristow J., Kyrpides N. J. Bacteriol. 190:2957-2965(2008) [PubMed: 18263724] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Hrk 5.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000505 Genomic DNA. Translation: ABL78855.1.
RefSeq	YP_920858.1. NC_008698.1.
3D structure databases
ProteinModelPortal	A1S075.
ModBase	Search...
Protein-protein interaction databases
STRING	A1S075.
Protein family/group databases
CAZy	CBM34. Carbohydrate-Binding Module Family 34. GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4600584.
GenomeReviews	Gene locus Tpen_1458 in contig CP000505_GR.
KEGG	tpe:Tpen_1458.
Phylogenomic databases
eggNOG	arNOG04723.
HOGENOM	HBG647285.
OMA	RAFPWDE.
PhylomeDB	A1S075.
ProtClustDB	CLSK568344.
Enzyme and pathway databases
BioCyc	TPEN368408:TPEN_1458-MONOMER.
Family and domain databases
InterPro	IPR015902. Alpha_amylase. IPR013780. Glyco_hydro_13_b. IPR006047. Glyco_hydro_13_cat_dom. IPR004185. Glyco_hydro_13_lg-like_dom. IPR006589. Glyco_hydro_13_sub_cat_dom. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. IPR014756. Ig_E-set. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 2 hits. G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
PANTHER	PTHR10357. Alpha_amylase. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. PF02903. Alpha-amylase_N. 1 hit. [Graphical view]
SMART	SM00642. Aamy. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit. SSF81296. Ig_E-set. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A1S075_THEPD

Accession

Primary (citable) accession number: A1S075

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	September 21, 2011
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)