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A1RZJ5 (A1RZJ5_THEPD) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.39 EMBL ABL78625.1
Gene names
Ordered Locus Names:Tpen_1227 EMBL ABL78625.1
OrganismThermofilum pendens (strain Hrk 5) [Reference proteome] [HAMAP] EMBL ABL78625.1
Taxonomic identifier368408 [NCBI]
Taxonomic lineageArchaeaCrenarchaeotaThermoproteiThermoprotealesThermofilaceaeThermofilum

Protein attributes

Sequence length443 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
   Molecular functionLyase EMBL ABL78625.1
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A1RZJ5 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: 64E48C8F1DAF8288

FASTA44348,972
        10         20         30         40         50         60 
MPEEFEPYGE FVVKSYLPDP DKDVIVTFRV TPSEGFTIED AAGGVAAESS VGTWTTLYQW 

        70         80         90        100        110        120 
YDKSRIDRLK GKAYYMESLG DGSYILRVAY PVELFEEGNM PAFLASVAGN IFGMRRVRSL 

       130        140        150        160        170        180 
RVEDIYLPEA FLKHFKGPSQ GVEGVRGKLK IWGRPIIGTV PKPKVGYSPE EVEKLAYEIL 

       190        200        210        220        230        240 
VGGMDFVKDD ENLAGPSYCR FEERAKAIMK AIDRAEKETG ERKAWLANIT ADVREMERRL 

       250        260        270        280        290        300 
KLVAELGNTH VMVDVVIAGW SSLTYVRDLA ADYKLAIHGH RAFHAAFTRN PYHGVSMFTL 

       310        320        330        340        350        360 
AKLYRIIGVD QLHVGTPEVG KLEAKAVDVI RMARLLREQT YKPDIEDGLH MQQPFPGIKP 

       370        380        390        400        410        420 
AFPVSSGGLH PGTLPAVIKA MGVDTVIQVG GGVVGHPDGP RAGAAAARQA VEAYLEGVPL 

       430        440 
QEYAKTHREL ARALEKWGQV IPV 

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References

[1]"Genome sequence of Thermofilum pendens reveals an exceptional loss of biosynthetic pathways without genome reduction."
Anderson I., Rodriguez J., Susanti D., Porat I., Reich C., Ulrich L.E., Elkins J.G., Mavromatis K., Lykidis A., Kim E., Thompson L.S., Nolan M., Land M., Copeland A., Lapidus A., Lucas S., Detter C., Zhulin I.B. expand/collapse author list , Olsen G.J., Whitman W., Mukhopadhyay B., Bristow J., Kyrpides N.
J. Bacteriol. 190:2957-2965(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Hrk 5.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000505 Genomic DNA. Translation: ABL78625.1.
RefSeqYP_920628.1. NC_008698.1.

3D structure databases

ProteinModelPortalA1RZJ5.
SMRA1RZJ5. Positions 11-442.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING368408.Tpen_1227.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABL78625; ABL78625; Tpen_1227.
GeneID4601724.
KEGGtpe:Tpen_1227.

Phylogenomic databases

eggNOGCOG1850.
HOGENOMHOG000230831.
KOK01601.
OMAHRAMHAA.
ProtClustDBPRK04208.

Enzyme and pathway databases

BioCycTPEN368408:GHSG-1282-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR017712. RuBisCO_III.
IPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
TIGRFAMsTIGR03326. rubisco_III. 1 hit.
PROSITEPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA1RZJ5_THEPD
AccessionPrimary (citable) accession number: A1RZJ5
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: March 19, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)