A1RZJ5 (A1RZJ5_THEPD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribulose 1,5-bisphosphate carboxylase large subunit EMBL ABL78625.1
EC=4.1.1.39 EMBL ABL78625.1

Gene names

Ordered Locus Names:

Tpen_1227 EMBL ABL78625.1

Organism

Thermofilum pendens (strain Hrk 5) [Reference proteome] [HAMAP] EMBL ABL78625.1

Taxonomic identifier

368408 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Crenarchaeota › Thermoprotei › Thermoproteales › Thermofilaceae › Thermofilum › Thermofilum pendens

Protein attributes

Sequence length	443 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
Molecular function	Lyase EMBL ABL78625.1
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	carbon fixation Inferred from electronic annotation. Source: InterPro
Molecular_function	magnesium ion binding Inferred from electronic annotation. Source: InterPro ribulose-bisphosphate carboxylase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1RZJ5 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: 64E48C8F1DAF8288	FASTA	443	48,972
	10 20 30 40 50 60 MPEEFEPYGE FVVKSYLPDP DKDVIVTFRV TPSEGFTIED AAGGVAAESS VGTWTTLYQW 70 80 90 100 110 120 YDKSRIDRLK GKAYYMESLG DGSYILRVAY PVELFEEGNM PAFLASVAGN IFGMRRVRSL 130 140 150 160 170 180 RVEDIYLPEA FLKHFKGPSQ GVEGVRGKLK IWGRPIIGTV PKPKVGYSPE EVEKLAYEIL 190 200 210 220 230 240 VGGMDFVKDD ENLAGPSYCR FEERAKAIMK AIDRAEKETG ERKAWLANIT ADVREMERRL 250 260 270 280 290 300 KLVAELGNTH VMVDVVIAGW SSLTYVRDLA ADYKLAIHGH RAFHAAFTRN PYHGVSMFTL 310 320 330 340 350 360 AKLYRIIGVD QLHVGTPEVG KLEAKAVDVI RMARLLREQT YKPDIEDGLH MQQPFPGIKP 370 380 390 400 410 420 AFPVSSGGLH PGTLPAVIKA MGVDTVIQVG GGVVGHPDGP RAGAAAARQA VEAYLEGVPL 430 440 QEYAKTHREL ARALEKWGQV IPV

References

[1]

"Genome sequence of Thermofilum pendens reveals an exceptional loss of biosynthetic pathways without genome reduction." Anderson I., Rodriguez J., Susanti D., Porat I., Reich C., Ulrich L.E., Elkins J.G., Mavromatis K., Lykidis A., Kim E., Thompson L.S., Nolan M., Land M., Copeland A., Lapidus A., Lucas S., Detter C., Zhulin I.B. , Olsen G.J., Whitman W., Mukhopadhyay B., Bristow J., Kyrpides N. J. Bacteriol. 190:2957-2965(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Hrk 5.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000505 Genomic DNA. Translation: ABL78625.1.
RefSeq	YP_920628.1. NC_008698.1.
3D structure databases
ProteinModelPortal	A1RZJ5.
SMR	A1RZJ5. Positions 11-442.
ModBase	Search...
Protein-protein interaction databases
STRING	368408.Tpen_1227.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABL78625; ABL78625; Tpen_1227.
GeneID	4601724.
KEGG	tpe:Tpen_1227.
Phylogenomic databases
eggNOG	COG1850.
HOGENOM	HOG000230831.
KO	K01601.
OMA	HRAMHAA.
ProtClustDB	PRK04208.
Family and domain databases
Gene3D	3.20.20.110. 1 hit. 3.30.70.150. 1 hit.
InterPro	IPR017712. RuBisCO_III. IPR020878. RuBisCo_large_chain_AS. IPR000685. RuBisCO_lsu_C. IPR017443. RuBisCO_lsu_fd_N. IPR017444. RuBisCO_lsu_N. [Graphical view]
Pfam	PF00016. RuBisCO_large. 1 hit. PF02788. RuBisCO_large_N. 1 hit. [Graphical view]
SUPFAM	SSF51649. RuBisCO_large. 1 hit. SSF54966. RuBisCO_large. 1 hit.
TIGRFAMs	TIGR03326. rubisco_III. 1 hit.
PROSITE	PS00157. RUBISCO_LARGE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A1RZJ5_THEPD

Accession

Primary (citable) accession number: A1RZJ5

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	May 1, 2013
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)