A1RY06 (A1RY06_THEPD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Peptidyl-tRNA hydrolase HAMAP MF_00628
Short name=PTH HAMAP MF_00628
EC=3.1.1.29 HAMAP MF_00628

Gene names

Name:	pth HAMAP MF_00628
Ordered Locus Names:	Tpen_0684

Organism

Thermofilum pendens (strain Hrk 5)

Taxonomic identifier

368408 [NCBI]

Taxonomic lineage

Archaea › Crenarchaeota › Thermoprotei › Thermoproteales › Thermofilaceae › Thermofilum

Protein attributes

Sequence length	118 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis By similarity. HAMAP MF_00628
Catalytic activity	N-substituted aminoacyl-tRNA + H2O = N-substituted amino acid + tRNA. HAMAP MF_00628
Subcellular location	Cytoplasm By similarity HAMAP MF_00628.
Sequence similarities	Belongs to the PTH2 family. HAMAP MF_00628

Ontologies

Keywords
Cellular component	Cytoplasm HAMAP MF_00628
Molecular function	Hydrolase HAMAP MF_00628 EMBL ABL78086.1
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: HAMAP
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	aminoacyl-tRNA hydrolase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A1RY06 [UniParc]. Last modified February 6, 2007. Version 1. Checksum: 77DCAE95DD699121	FASTA	118	12,938
	10 20 30 40 50 60 MGSLKQVIVL RRDLDMGKGK MVAQGCHASV SAVLETLKRN REIVERWVEE GQRKIVVRVD 70 80 90 100 110 SEEELLSVYR KALELGLVAV LVEDKGLTQL PPGTPTAVGI GPADEEIIDK VTGHLKLL

References

[1]

"Genome sequence of Thermofilum pendens reveals an exceptional loss of biosynthetic pathways without genome reduction." Anderson I., Rodriguez J., Susanti D., Porat I., Reich C., Ulrich L.E., Elkins J.G., Mavromatis K., Lykidis A., Kim E., Thompson L.S., Nolan M., Land M., Copeland A., Lapidus A., Lucas S., Detter C., Zhulin I.B. , Olsen G.J., Whitman W., Mukhopadhyay B., Bristow J., Kyrpides N. J. Bacteriol. 190:2957-2965(2008) [PubMed: 18263724] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Hrk 5.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000505 Genomic DNA. Translation: ABL78086.1.
RefSeq	YP_920089.1. NC_008698.1.
3D structure databases
ProteinModelPortal	A1RY06.
SMR	A1RY06. Positions 1-118.
ModBase	Search...
Protein-protein interaction databases
STRING	A1RY06.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4601884.
GenomeReviews	Gene locus Tpen_0684 in contig CP000505_GR.
KEGG	tpe:Tpen_0684.
Phylogenomic databases
eggNOG	arNOG11345.
HOGENOM	HBG526257.
OMA	KSLVMEY.
PhylomeDB	A1RY06.
ProtClustDB	PRK04322.
Enzyme and pathway databases
BioCyc	TPEN368408:TPEN_0684-MONOMER.
Family and domain databases
HAMAP	MF_00628. Pept_tRNA_hydro_arch. [Tree]
InterPro	IPR023476. Pep_tRNA_hydro_II_dom. IPR002833. Pep_tRNA_hydro_PTH2. [Graphical view]
Gene3D	G3DSA:3.40.1490.10. G3DSA:3.40.1490.10. 1 hit.
KO	K04794.
PANTHER	PTHR12649:SF6. PTHR12649:SF6. 1 hit.
Pfam	PF01981. PTH2. 1 hit. [Graphical view]
SUPFAM	SSF102462. SSF102462. 1 hit.
TIGRFAMs	TIGR00283. Arch_pth2. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A1RY06_THEPD

Accession

Primary (citable) accession number: A1RY06

Entry history

Integrated into UniProtKB/TrEMBL:	February 6, 2007
Last sequence update:	February 6, 2007
Last modified:	November 16, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)