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Protein

DNA-binding protein Tpen_0471

Gene

Tpen_0471

Organism
Thermofilum pendens (strain DSM 2475 / Hrk 5)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionDNA-binding

Enzyme and pathway databases

BioCyciTPEN368408:GHSG-491-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
DNA-binding protein Tpen_0471UniRule annotation
Gene namesi
Ordered Locus Names:Tpen_0471
OrganismiThermofilum pendens (strain DSM 2475 / Hrk 5)
Taxonomic identifieri368408 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiThermoprotealesThermofilaceaeThermofilum
Proteomesi
  • UP000000641 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002845701 – 116DNA-binding protein Tpen_0471Add BLAST116

Proteomic databases

PRIDEiA1RXF0

Interactioni

Protein-protein interaction databases

STRINGi368408.Tpen_0471

Structurei

3D structure databases

ProteinModelPortaliA1RXF0
SMRiA1RXF0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the PDCD5 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04179 Archaea
COG2118 LUCA
HOGENOMiHOG000194121
KOiK06875
OMAiRLNTVKM
OrthoDBiPOG093Z0OC7

Family and domain databases

Gene3Di1.10.8.140, 1 hit
HAMAPiMF_00026 dsDNA_bind, 1 hit
InterProiView protein in InterPro
IPR022889 DNA_bind_arc
IPR002836 PDCD5-like
IPR036883 PDCD5-like_sf
PANTHERiPTHR10840 PTHR10840, 1 hit
PfamiView protein in Pfam
PF01984 dsDNA_bind, 1 hit
PIRSFiPIRSF015730 TFAR19, 1 hit
SUPFAMiSSF46950 SSF46950, 1 hit

Sequencei

Sequence statusi: Complete.

A1RXF0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSYDEGGEEL EEIKRRKLLE YQRALEAEKA KEEQKAREEA MRQEILRRIL
60 70 80 90 100
TPEARARLSN LKLVKPELVE ALEIQLIQLA ESRSVRVPID DETLKQILAR
110
LYEAQRAREV KFRVSF
Length:116
Mass (Da):13,722
Last modified:February 6, 2007 - v1
Checksum:i7B2732DFE65262DC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000505 Genomic DNA Translation: ABL77880.1
RefSeqiWP_011752145.1, NC_008698.1

Genome annotation databases

EnsemblBacteriaiABL77880; ABL77880; Tpen_0471
GeneIDi4602030
KEGGitpe:Tpen_0471

Similar proteinsi

Entry informationi

Entry nameiY471_THEPD
AccessioniPrimary (citable) accession number: A1RXF0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 17, 2007
Last sequence update: February 6, 2007
Last modified: May 23, 2018
This is version 52 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
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Main funding by: National Institutes of Health