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Protein

30S ribosomal protein S6e

Gene

rps6e

Organism
Pyrobaculum islandicum (strain DSM 4184 / JCM 9189 / GEO3)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S6eUniRule annotation
Gene namesi
Name:rps6eUniRule annotation
Ordered Locus Names:Pisl_1589
OrganismiPyrobaculum islandicum (strain DSM 4184 / JCM 9189 / GEO3)
Taxonomic identifieri384616 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiThermoprotealesThermoproteaceaePyrobaculum
Proteomesi
  • UP000002595 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000506421 – 14830S ribosomal protein S6eAdd BLAST148

Interactioni

Protein-protein interaction databases

STRINGi384616.Pisl_1589.

Structurei

3D structure databases

SMRiA1RUW1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eS6 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG01946. Archaea.
COG2125. LUCA.
HOGENOMiHOG000226356.
KOiK02991.
OMAiDGFPMRP.
OrthoDBiPOG093Z0FEK.

Family and domain databases

HAMAPiMF_00512. Ribosomal_S6e. 1 hit.
InterProiView protein in InterPro
IPR001377. Ribosomal_S6e.
IPR020924. Ribosomal_S6e_arc.
IPR018282. Ribosomal_S6e_CS.
PANTHERiPTHR11502. PTHR11502. 1 hit.
PfamiView protein in Pfam
PF01092. Ribosomal_S6e. 1 hit.
SMARTiView protein in SMART
SM01405. Ribosomal_S6e. 1 hit.
PROSITEiView protein in PROSITE
PS00578. RIBOSOMAL_S6E. 1 hit.

Sequencei

Sequence statusi: Complete.

A1RUW1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPTFKLVLSD PISGKARQFE IKDPLAQRFI GLKIGDELDG SVLKDFLELP
60 70 80 90 100
KGAKIRITGG SGIEGAPMHP GVPGPVKRYI LADGPPGYWP PKRGMRKRKL
110 120 130 140
VRGNTISDSI VQINAVIVYP QGYSGPPAIP LGAKEIEKLT KAKEGTPA
Length:148
Mass (Da):15,895
Last modified:February 6, 2007 - v1
Checksum:i6341BCE7A7BD3353
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000504 Genomic DNA. Translation: ABL88743.1.
RefSeqiWP_011763318.1. NC_008701.1.

Genome annotation databases

EnsemblBacteriaiABL88743; ABL88743; Pisl_1589.
GeneIDi4617384.
KEGGipis:Pisl_1589.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000504 Genomic DNA. Translation: ABL88743.1.
RefSeqiWP_011763318.1. NC_008701.1.

3D structure databases

SMRiA1RUW1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi384616.Pisl_1589.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABL88743; ABL88743; Pisl_1589.
GeneIDi4617384.
KEGGipis:Pisl_1589.

Phylogenomic databases

eggNOGiarCOG01946. Archaea.
COG2125. LUCA.
HOGENOMiHOG000226356.
KOiK02991.
OMAiDGFPMRP.
OrthoDBiPOG093Z0FEK.

Family and domain databases

HAMAPiMF_00512. Ribosomal_S6e. 1 hit.
InterProiView protein in InterPro
IPR001377. Ribosomal_S6e.
IPR020924. Ribosomal_S6e_arc.
IPR018282. Ribosomal_S6e_CS.
PANTHERiPTHR11502. PTHR11502. 1 hit.
PfamiView protein in Pfam
PF01092. Ribosomal_S6e. 1 hit.
SMARTiView protein in SMART
SM01405. Ribosomal_S6e. 1 hit.
PROSITEiView protein in PROSITE
PS00578. RIBOSOMAL_S6E. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRS6E_PYRIL
AccessioniPrimary (citable) accession number: A1RUW1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: February 6, 2007
Last modified: June 7, 2017
This is version 54 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.