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Unreviewed, UniProtKB/TrEMBL A1RT62 (A1RT62_PYRIL)

Last modified December 15, 2009. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Starch synthase EMBL ABL88144.1
    EC=2.4.1.21 EMBL ABL88144.1
Gene names
Ordered Locus Names: Pisl_0968
OrganismPyrobaculum islandicum (strain DSM 4184 / JCM 9189) [Complete proteome] [HAMAP]
Taxonomic identifier384616 [NCBI]
Taxonomic lineageArchaeaCrenarchaeotaThermoproteiThermoprotealesThermoproteaceaePyrobaculum

Protein attributes

Sequence length482 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existencePredicted.

Ontologies

Keywords
   Molecular functionGlycosyltransferase EMBL ABL88144.1
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processbiosynthetic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionstarch synthase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A1RT62-1 [UniParc].

Last modified February 6, 2007. Version 1.
Checksum: 427073C03DF5E5A0

FASTA48254,807
        10         20         30         40         50         60 
MYAPEQIKRV YILTMEFSGL VKVGGLGEAV RQYAVGLARK GYDVTVLMPS HGRHLDPKRG 

        70         80         90        100        110        120 
FELYPLDFKT CGERRGLDGK LYPYCLGAEM TFIEGVKVVM FKGLDYATGH IFDKWGVYEY 

       130        140        150        160        170        180 
TEEKASLLTR AVTAFAERFG LPDLIHINDW PTVLAGVALK DLAERRGLAL PLFFTIHLSW 

       190        200        210        220        230        240 
DYRFPWHYAE WSGLYNRQHP VWRVCCHSWE YYNAVWDEGW GSVERFGVVE ADAVSTVSYG 

       250        260        270        280        290        300 
YLEELLRKYG GWLRPKTCVV YNATDWSLKD VEGISEEDTW RLVEEVERMG VIGGLEKAGA 

       310        320        330        340        350        360 
LFLTVGRLTY QKGIDLALKA LDYAPSARLL ILGLPAGERD YEEYIKSLVW ERRGRAALSV 

       370        380        390        400        410        420 
AKIPPRLYKA LHYVAKALIM PSRWEPFGIS AIEAMALGTP VIATKTGGLP EIVDGMGLLV 

       430        440        450        460        470        480 
EPEDVENLGR AIEAIAVGRY KPPPRHYIVN YVNRKFRIEH TVEMLEQCYE KARQFAFFRA 


LS 

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References

[1]"Complete sequence of Pyrobaculum islandicum DSM 4184."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Meincke L., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Mikhailova N., Lowe T., Richardson P.
Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

CP000504 Genomic DNA. Translation: ABL88144.1.
RefSeqYP_930487.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGA1RT62.

Genome annotation databases

GeneID4617241.
GenomeReviewsGene locus Pisl_0968 in contig CP000504_GR.
KEGGpis:Pisl_0968.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAMPSRWEP.
PhylomeDBA1RT62.

Family and domain databases

InterProIPR001296. Glyco_trans_1.
IPR013534. Glyco_transf_5.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA1RT62_PYRIL
AccessionPrimary (citable) accession number: A1RT62
Entry history
Integrated into UniProtKB/TrEMBL: February 6, 2007
Last sequence update: February 6, 2007
Last modified: December 15, 2009
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information