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Protein

30S ribosomal protein S12

Gene

rps12

Organism
Pyrobaculum islandicum (strain DSM 4184 / JCM 9189 / GEO3)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S12UniRule annotation
Gene namesi
Name:rps12UniRule annotation
Ordered Locus Names:Pisl_0698
OrganismiPyrobaculum islandicum (strain DSM 4184 / JCM 9189 / GEO3)
Taxonomic identifieri384616 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiThermoprotealesThermoproteaceaePyrobaculum
Proteomesi
  • UP000002595 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002960541 – 14730S ribosomal protein S12Add BLAST147

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi384616.Pisl_0698.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S12P family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04255. Archaea.
COG0048. LUCA.
HOGENOMiHOG000040064.
KOiK02950.
OMAiMPGKKSP.

Family and domain databases

CDDicd03367. Ribosomal_S23. 1 hit.
HAMAPiMF_00403_A. Ribosomal_S12_A. 1 hit.
InterProiIPR012340. NA-bd_OB-fold.
IPR006032. Ribosomal_S12/S23.
IPR022863. Ribosomal_S12_arc.
IPR005680. Ribosomal_S23_euk/arc.
[Graphical view]
PANTHERiPTHR11652. PTHR11652. 1 hit.
PfamiPF00164. Ribosom_S12_S23. 1 hit.
[Graphical view]
PIRSFiPIRSF002133. Ribosomal_S12/S23. 1 hit.
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00982. uS12_E_A. 1 hit.

Sequencei

Sequence statusi: Complete.

A1RSE4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPGKKSPYGL FAGGKLKRKR KRFKWNDITY KRKMLGLVEK YDPLEGAPMA
60 70 80 90 100
RGIVLEKVGV EARKPNAAVR KCVRVQLVKN GKVVTAFVPL DGSLNYINEH
110 120 130 140
DEVIIERIGG PEGRSLGDIP GVRFKVIKVN GVSLWAIWRG KKQKPTR
Length:147
Mass (Da):16,509
Last modified:February 6, 2007 - v1
Checksum:i6F56AB2DC894C8A7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000504 Genomic DNA. Translation: ABL87876.1.
RefSeqiWP_011762452.1. NC_008701.1.

Genome annotation databases

EnsemblBacteriaiABL87876; ABL87876; Pisl_0698.
GeneIDi4617172.
KEGGipis:Pisl_0698.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000504 Genomic DNA. Translation: ABL87876.1.
RefSeqiWP_011762452.1. NC_008701.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi384616.Pisl_0698.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABL87876; ABL87876; Pisl_0698.
GeneIDi4617172.
KEGGipis:Pisl_0698.

Phylogenomic databases

eggNOGiarCOG04255. Archaea.
COG0048. LUCA.
HOGENOMiHOG000040064.
KOiK02950.
OMAiMPGKKSP.

Family and domain databases

CDDicd03367. Ribosomal_S23. 1 hit.
HAMAPiMF_00403_A. Ribosomal_S12_A. 1 hit.
InterProiIPR012340. NA-bd_OB-fold.
IPR006032. Ribosomal_S12/S23.
IPR022863. Ribosomal_S12_arc.
IPR005680. Ribosomal_S23_euk/arc.
[Graphical view]
PANTHERiPTHR11652. PTHR11652. 1 hit.
PfamiPF00164. Ribosom_S12_S23. 1 hit.
[Graphical view]
PIRSFiPIRSF002133. Ribosomal_S12/S23. 1 hit.
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00982. uS12_E_A. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRS12_PYRIL
AccessioniPrimary (citable) accession number: A1RSE4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 24, 2007
Last sequence update: February 6, 2007
Last modified: November 2, 2016
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.