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A1RS32

- SYR_PYRIL

UniProt

A1RS32 - SYR_PYRIL

Protein

Arginine--tRNA ligase

Gene

argS

Organism
Pyrobaculum islandicum (strain DSM 4184 / JCM 9189)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 52 (01 Oct 2014)
      Sequence version 1 (06 Feb 2007)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).UniRule annotation

    GO - Molecular functioni

    1. arginine-tRNA ligase activity Source: UniProtKB-HAMAP
    2. ATP binding Source: UniProtKB-HAMAP

    GO - Biological processi

    1. arginyl-tRNA aminoacylation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Aminoacyl-tRNA synthetase, Ligase

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciPISL384616:GC8H-602-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Arginine--tRNA ligaseUniRule annotation (EC:6.1.1.19UniRule annotation)
    Alternative name(s):
    Arginyl-tRNA synthetaseUniRule annotation
    Short name:
    ArgRSUniRule annotation
    Gene namesi
    Name:argSUniRule annotation
    Ordered Locus Names:Pisl_0586
    OrganismiPyrobaculum islandicum (strain DSM 4184 / JCM 9189)
    Taxonomic identifieri384616 [NCBI]
    Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiThermoprotealesThermoproteaceaePyrobaculum
    ProteomesiUP000002595: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 632632Arginine--tRNA ligasePRO_1000018098Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi384616.Pisl_0586.

    Structurei

    3D structure databases

    ProteinModelPortaliA1RS32.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Motif

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Motifi120 – 13011"HIGH" regionAdd
    BLAST

    Sequence similaritiesi

    Belongs to the class-I aminoacyl-tRNA synthetase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0018.
    HOGENOMiHOG000247213.
    KOiK01887.
    OMAiAGEWDAT.

    Family and domain databases

    Gene3Di1.10.730.10. 1 hit.
    3.40.50.620. 2 hits.
    HAMAPiMF_00123. Arg_tRNA_synth.
    InterProiIPR001278. Arg-tRNA-ligase.
    IPR008909. DALR_anticod-bd.
    IPR014729. Rossmann-like_a/b/a_fold.
    IPR009080. tRNAsynth_1a_anticodon-bd.
    [Graphical view]
    PANTHERiPTHR11956. PTHR11956. 1 hit.
    PfamiPF05746. DALR_1. 1 hit.
    PF00750. tRNA-synt_1d. 2 hits.
    [Graphical view]
    PRINTSiPR01038. TRNASYNTHARG.
    SMARTiSM00836. DALR_1. 1 hit.
    [Graphical view]
    SUPFAMiSSF47323. SSF47323. 1 hit.
    TIGRFAMsiTIGR00456. argS. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A1RS32-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDPLKPPREE FEKFVAEVAY AIGIGEVPEI ERSKRFGYFS AKFHKYRVDA    50
    GKLKETVDSL KSRQFKYLTS ISVDGLYLNV DLAVEKVAEL TFRAVAEMGD 100
    KYGFTDECKI GSFLVEHTSA NPIHPLHIGH GRNAILGDSL VRLLRFCGNV 150
    VQSHFYVDDC GVQVMYAAIG YNVVKKYVDE VLKRTKPDVV IGAIYSAVNA 200
    IAEINRLKKE LEKEKDDEKR REIINEIDSW VSVLKRLIDT EGEVINKLVE 250
    VLGQRNIVEE AAELNKRYET GDPEVKKIVR EVVELVLKGQ RETLARLGIE 300
    LDSWDYESDI AVWSGEATRV VSELRRRWPQ YIDDRGGAVV FRADKFVEDF 350
    KLWDVLDLPK FIPPVTLTRS DGTTLYVTRD VAYALWQARR GFDKVIRVIS 400
    TEQTHEQAHV RIILYALGYE DVAKKLIHYA YEMVNLPGMK MSARRGQYIS 450
    LDEILDEAVE RSADLVKEKN PEIAGIIAER VGVGSVRYAF LSTSPRKPIE 500
    FKWETVLNMR QNSGPFLQYT YVRAYSILEK AQEIDLKKVA IPKEILPEER 550
    ELILKVAEWP SVVREATRAL RPDYVAEFLD GLALIFNSYY EKAPVLKTEE 600
    PVRSFRLALV NSVKTVLAAG FYILGIPTLT KM 632
    Length:632
    Mass (Da):72,117
    Last modified:February 6, 2007 - v1
    Checksum:i3A481240A6BC3E5F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000504 Genomic DNA. Translation: ABL87764.1.
    RefSeqiYP_930107.1. NC_008701.1.

    Genome annotation databases

    EnsemblBacteriaiABL87764; ABL87764; Pisl_0586.
    GeneIDi4616557.
    KEGGipis:Pisl_0586.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000504 Genomic DNA. Translation: ABL87764.1 .
    RefSeqi YP_930107.1. NC_008701.1.

    3D structure databases

    ProteinModelPortali A1RS32.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 384616.Pisl_0586.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABL87764 ; ABL87764 ; Pisl_0586 .
    GeneIDi 4616557.
    KEGGi pis:Pisl_0586.

    Phylogenomic databases

    eggNOGi COG0018.
    HOGENOMi HOG000247213.
    KOi K01887.
    OMAi AGEWDAT.

    Enzyme and pathway databases

    BioCyci PISL384616:GC8H-602-MONOMER.

    Family and domain databases

    Gene3Di 1.10.730.10. 1 hit.
    3.40.50.620. 2 hits.
    HAMAPi MF_00123. Arg_tRNA_synth.
    InterProi IPR001278. Arg-tRNA-ligase.
    IPR008909. DALR_anticod-bd.
    IPR014729. Rossmann-like_a/b/a_fold.
    IPR009080. tRNAsynth_1a_anticodon-bd.
    [Graphical view ]
    PANTHERi PTHR11956. PTHR11956. 1 hit.
    Pfami PF05746. DALR_1. 1 hit.
    PF00750. tRNA-synt_1d. 2 hits.
    [Graphical view ]
    PRINTSi PR01038. TRNASYNTHARG.
    SMARTi SM00836. DALR_1. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47323. SSF47323. 1 hit.
    TIGRFAMsi TIGR00456. argS. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Pyrobaculum islandicum DSM 4184."
      Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Meincke L., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M.
      , Hauser L., Kyrpides N., Mikhailova N., Lowe T., Richardson P.
      Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 4184 / JCM 9189.

    Entry informationi

    Entry nameiSYR_PYRIL
    AccessioniPrimary (citable) accession number: A1RS32
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 15, 2008
    Last sequence update: February 6, 2007
    Last modified: October 1, 2014
    This is version 52 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Aminoacyl-tRNA synthetases
      List of aminoacyl-tRNA synthetase entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3