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Protein

30S ribosomal protein S8e

Gene

rps8e

Organism
Pyrobaculum islandicum (strain DSM 4184 / JCM 9189 / GEO3)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciPISL384616:GC8H-591-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S8eUniRule annotation
Gene namesi
Name:rps8eUniRule annotation
Ordered Locus Names:Pisl_0575
OrganismiPyrobaculum islandicum (strain DSM 4184 / JCM 9189 / GEO3)
Taxonomic identifieri384616 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiThermoprotealesThermoproteaceaePyrobaculum
Proteomesi
  • UP000002595 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 13113130S ribosomal protein S8ePRO_0000304179Add
BLAST

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi384616.Pisl_0575.

Structurei

3D structure databases

ProteinModelPortaliA1RS21.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S8e family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04154. Archaea.
COG2007. LUCA.
HOGENOMiHOG000108969.
KOiK02995.
OMAiYANVYIP.

Family and domain databases

HAMAPiMF_00029. Ribosomal_S8e.
InterProiIPR020919. Ribosomal_protein_S8e_arc.
IPR001047. Ribosomal_S8e.
IPR022309. Ribosomal_S8e/biogenesis_NSA2.
[Graphical view]
PANTHERiPTHR10394. PTHR10394. 1 hit.
PfamiPF01201. Ribosomal_S8e. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00307. eS8. 1 hit.

Sequencei

Sequence statusi: Complete.

A1RS21-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLAAFYKGR DLKKPSGGKK GRVRKTKKKA LCGGPPQIPK LGERDLRLVE
60 70 80 90 100
RVTGGNLKVR VREVRYANVY IPKERRHVKA KILSILSTPA NPDFARRNLI
110 120 130
VKGAVIQTEV GRAVVTSRPG QDGVINAVLI E
Length:131
Mass (Da):14,477
Last modified:February 6, 2007 - v1
Checksum:i04AB156441BEAFE3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000504 Genomic DNA. Translation: ABL87753.1.
RefSeqiWP_011762329.1. NC_008701.1.

Genome annotation databases

EnsemblBacteriaiABL87753; ABL87753; Pisl_0575.
GeneIDi4616288.
KEGGipis:Pisl_0575.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000504 Genomic DNA. Translation: ABL87753.1.
RefSeqiWP_011762329.1. NC_008701.1.

3D structure databases

ProteinModelPortaliA1RS21.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi384616.Pisl_0575.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABL87753; ABL87753; Pisl_0575.
GeneIDi4616288.
KEGGipis:Pisl_0575.

Phylogenomic databases

eggNOGiarCOG04154. Archaea.
COG2007. LUCA.
HOGENOMiHOG000108969.
KOiK02995.
OMAiYANVYIP.

Enzyme and pathway databases

BioCyciPISL384616:GC8H-591-MONOMER.

Family and domain databases

HAMAPiMF_00029. Ribosomal_S8e.
InterProiIPR020919. Ribosomal_protein_S8e_arc.
IPR001047. Ribosomal_S8e.
IPR022309. Ribosomal_S8e/biogenesis_NSA2.
[Graphical view]
PANTHERiPTHR10394. PTHR10394. 1 hit.
PfamiPF01201. Ribosomal_S8e. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00307. eS8. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Pyrobaculum islandicum DSM 4184."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Meincke L., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M.
    , Hauser L., Kyrpides N., Mikhailova N., Lowe T., Richardson P.
    Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 4184 / JCM 9189 / GEO3.

Entry informationi

Entry nameiRS8E_PYRIL
AccessioniPrimary (citable) accession number: A1RS21
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 11, 2007
Last sequence update: February 6, 2007
Last modified: November 11, 2015
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.